Literature DB >> 11334974

A new multiplex PCR strategy for the simultaneous determination of four genetic polymorphisms affecting HIV-1 disease progression.

T B Kristiansen1, T B Knudsen, S Ohlendorff, J Eugen-Olsen.   

Abstract

The CCR5 Delta32, CCR2 64I, SDF1 3'A, and CCR5 promoter 59029 polymorphisms have been suggested to influence HIV-1 disease progression. Furthermore, the CCR5 Delta32 and the CCR2 64I polymorphisms have been associated with various other diseases. The purpose of the present study was to develop a multiplex assay for the simultaneous determination of these four polymorphisms. Results obtained with the multiplex assay were compared to results obtained by conventional RFLP-PCR and no differences were observed. The multiplex assay offers a quick tool for the determination of the CCR5 Delta32, CCR2 64I, SDF1 3'A, and CCR5 promoter 59029 A/G polymorphisms.

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Year:  2001        PMID: 11334974     DOI: 10.1016/s0022-1759(01)00349-0

Source DB:  PubMed          Journal:  J Immunol Methods        ISSN: 0022-1759            Impact factor:   2.303


  15 in total

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2.  Combined effect of CCR5-Delta32 heterozygosity and the CCR5 promoter polymorphism -2459 A/G on CCR5 expression and resistance to human immunodeficiency virus type 1 transmission.

Authors:  Florian Hladik; Huanliang Liu; Emily Speelmon; Devon Livingston-Rosanoff; Sean Wilson; Polachai Sakchalathorn; Yon Hwangbo; Benjamin Greene; Tuofu Zhu; M Juliana McElrath
Journal:  J Virol       Date:  2005-09       Impact factor: 5.103

3.  Virus-specific CD8+ T-cell responses better define HIV disease progression than HLA genotype.

Authors:  Warren L Dinges; Julia Richardt; David Friedrich; Emilie Jalbert; Yi Liu; Claire E Stevens; Janine Maenza; Ann C Collier; Daniel E Geraghty; Jeremy Smith; Zoe Moodie; James I Mullins; M Juliana McElrath; Helen Horton
Journal:  J Virol       Date:  2010-02-10       Impact factor: 5.103

4.  Case of yellow fever vaccine--associated viscerotropic disease with prolonged viremia, robust adaptive immune responses, and polymorphisms in CCR5 and RANTES genes.

Authors:  Bali Pulendran; Joseph Miller; Troy D Querec; Rama Akondy; Nelson Moseley; Oscar Laur; John Glidewell; Nathan Monson; Tuofu Zhu; Haiying Zhu; Sylvija Staprans; David Lee; Margo A Brinton; Andrey A Perelygin; Claudia Vellozzi; Philip Brachman; Susan Lalor; Dirk Teuwen; Rachel B Eidex; Marty Cetron; Frances Priddy; Carlos del Rio; John Altman; Rafi Ahmed
Journal:  J Infect Dis       Date:  2008-08-15       Impact factor: 5.226

5.  Superior control of HIV-1 replication by CD8+ T cells targeting conserved epitopes: implications for HIV vaccine design.

Authors:  Pratima Kunwar; Natalie Hawkins; Warren L Dinges; Yi Liu; Erin E Gabriel; David A Swan; Claire E Stevens; Janine Maenza; Ann C Collier; James I Mullins; Tomer Hertz; Xuesong Yu; Helen Horton
Journal:  PLoS One       Date:  2013-05-31       Impact factor: 3.240

6.  The temporal increase in HIV-1 non-R5 tropism frequency among newly diagnosed patients from northern Poland is associated with clustered transmissions.

Authors:  Miłosz Parczewski; Magdalena Leszczyszyn-Pynka; Magdalena Witak-Jędra; Katarzyna Maciejewska; Sławomira Myślińska; Anna Urbańska
Journal:  J Int AIDS Soc       Date:  2015-08-20       Impact factor: 5.396

7.  Distribution of CCR5-Delta32, CCR5 promoter 59029 A/G, CCR2-64I and SDF1-3'A genetic polymorphisms in HIV-1 infected and uninfected patients in the west region of Cameroon.

Authors:  Céline Nguefeu Nkenfou; Linda Chapdeleine Mouafo Mekue; Christelle Tafou Nana; Jules Roger Kuiate
Journal:  BMC Res Notes       Date:  2013-07-23

8.  Heterosexual and homosexual partners practising unprotected sex may develop allogeneic immunity and to a lesser extent tolerance.

Authors:  Cherry Kingsley; Barry Peters; Kaboutar Babaahmady; Laura Pomeroy; Durdana Rahman; Robert Vaughan; Thomas Lehner
Journal:  PLoS One       Date:  2009-11-23       Impact factor: 3.240

9.  Sequence variants of chemokine receptor genes and susceptibility to HIV-1 infection.

Authors:  M Parczewski; M Leszczyszyn-Pynka; M Kaczmarczyk; G Adler; A Binczak-Kuleta; B Loniewska; A Boron-Kaczmarska; A Ciechanowicz
Journal:  J Appl Genet       Date:  2009       Impact factor: 2.653

10.  CCR5Delta32 genotypes in a German HIV-1 seroconverter cohort and report of HIV-1 infection in a CCR5Delta32 homozygous individual.

Authors:  Djin-Ye Oh; Heiko Jessen; Claudia Kücherer; Konrad Neumann; Nari Oh; Gabriele Poggensee; Barbara Bartmeyer; Arne Jessen; Axel Pruss; Ralf R Schumann; Osamah Hamouda
Journal:  PLoS One       Date:  2008-07-23       Impact factor: 3.240

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