Literature DB >> 11325506

Evolution with material symbol systems.

L M Rocha1.   

Abstract

Pattee's semantic closure principle is used to study the characteristics and requirements of evolving material symbols systems. By contrasting agents that reproduce via genetic variation with agents that reproduce via self-inspection, we reach the conclusion that symbols are necessary to attain open-ended evolution, but only if the phenotypes of agents are the result of a material, self-organization process. This way, a study of the inter-dependencies of symbol and matter is presented. This study is based first on a theoretical treatment of symbolic representations, and secondly on simulations of simple agents with matter-symbol inter-dependencies. The agent-based simulations use evolutionary algorithms with indirectly encoded phenotypes. The indirect encoding is based on Fuzzy Development programs, which are procedures for combining fuzzy sets in such a way as to model self-organizing development processes.

Mesh:

Year:  2001        PMID: 11325506     DOI: 10.1016/s0303-2647(01)00110-1

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  7 in total

Review 1.  Dichotomy in the definition of prescriptive information suggests both prescribed data and prescribed algorithms: biosemiotics applications in genomic systems.

Authors:  David J D'Onofrio; David L Abel; Donald E Johnson
Journal:  Theor Biol Med Model       Date:  2012-03-14       Impact factor: 2.432

Review 2.  Three subsets of sequence complexity and their relevance to biopolymeric information.

Authors:  David L Abel; Jack T Trevors
Journal:  Theor Biol Med Model       Date:  2005-08-11       Impact factor: 2.432

Review 3.  Redundancy of the genetic code enables translational pausing.

Authors:  David J D'Onofrio; David L Abel
Journal:  Front Genet       Date:  2014-05-20       Impact factor: 4.599

Review 4.  Is life unique?

Authors:  David L Abel
Journal:  Life (Basel)       Date:  2011-12-30

5.  The Universal Plausibility Metric (UPM) & Principle (UPP).

Authors:  David L Abel
Journal:  Theor Biol Med Model       Date:  2009-12-03       Impact factor: 2.432

Review 6.  The capabilities of chaos and complexity.

Authors:  David L Abel
Journal:  Int J Mol Sci       Date:  2009-01-09       Impact factor: 6.208

7.  Measuring the functional sequence complexity of proteins.

Authors:  Kirk K Durston; David K Y Chiu; David L Abel; Jack T Trevors
Journal:  Theor Biol Med Model       Date:  2007-12-06       Impact factor: 2.432

  7 in total

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