Literature DB >> 11323721

Carboxyl proteinase from Pseudomonas defines a novel family of subtilisin-like enzymes.

A Wlodawer1, M Li, Z Dauter, A Gustchina, K Uchida, H Oyama, B M Dunn, K Oda.   

Abstract

The crystal structure of a pepstatin-insensitive carboxyl proteinase from Pseudomonas sp. 101 (PSCP) has been solved by single-wavelength anomalous diffraction using the absorption peak of bromide anions. Structures of the uninhibited enzyme and of complexes with an inhibitor that was either covalently or noncovalently bound were refined at 1.0-1.4 A resolution. The structure of PSCP comprises a single compact domain with a diameter of approximately 55 A, consisting of a seven-stranded parallel beta-sheet flanked on both sides by a number of helices. The fold of PSCP is a superset of the subtilisin fold, and the covalently bound inhibitor is linked to the enzyme through a serine residue. Thus, the structure of PSCP defines a novel family of serine-carboxyl proteinases (defined as MEROPS S53) with a unique catalytic triad consisting of Glu 80, Asp 84 and Ser 287.

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Year:  2001        PMID: 11323721     DOI: 10.1038/87610

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  20 in total

1.  Collagenolytic serine-carboxyl proteinase from Alicyclobacillus sendaiensis strain NTAP-1: purification, characterization, gene cloning, and heterologous expression.

Authors:  Naoki Tsuruoka; Toru Nakayama; Masako Ashida; Hisashi Hemmi; Masahiro Nakao; Hiroyuki Minakata; Hiroshi Oyama; Kohei Oda; Tokuzo Nishino
Journal:  Appl Environ Microbiol       Date:  2003-01       Impact factor: 4.792

2.  Aorsin, a novel serine proteinase with trypsin-like specificity at acidic pH.

Authors:  Byung Rho Lee; Masato Furukawa; Koichiro Yamashita; Yurie Kanasugi; Choko Kawabata; Kenichi Hirano; Kenichi Ando; Eiji Ichishima
Journal:  Biochem J       Date:  2003-04-15       Impact factor: 3.857

3.  The importance of dynamics in substrate-assisted catalysis and specificity.

Authors:  Qin Xu; Haobo Guo; Alexander Wlodawer; Hong Guo
Journal:  J Am Chem Soc       Date:  2006-05-10       Impact factor: 15.419

Review 4.  Correlations between genotype, ultrastructural morphology and clinical phenotype in the neuronal ceroid lipofuscinoses.

Authors:  Sara E Mole; Ruth E Williams; Hans H Goebel
Journal:  Neurogenetics       Date:  2005-09-28       Impact factor: 2.660

5.  Computational studies of polyurethanases from Pseudomonas.

Authors:  Vanessa Petry do Canto; Claudia Elizabeth Thompson; Paulo Augusto Netz
Journal:  J Mol Model       Date:  2021-01-23       Impact factor: 1.810

Review 6.  Unconventional serine proteases: variations on the catalytic Ser/His/Asp triad configuration.

Authors:  Ozlem Doğan Ekici; Mark Paetzel; Ross E Dalbey
Journal:  Protein Sci       Date:  2008-09-29       Impact factor: 6.725

7.  Intrinsic evolutionary constraints on protease structure, enzyme acylation, and the identity of the catalytic triad.

Authors:  Andrew R Buller; Craig A Townsend
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-04       Impact factor: 11.205

8.  The Bacillus subtilis signaling protein SpoIVB defines a new family of serine peptidases.

Authors:  Ngo T Hoa; James A Brannigan; Simon M Cutting
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

9.  Structural analysis of a Vibrio phospholipase reveals an unusual Ser-His-chloride catalytic triad.

Authors:  Ye Wan; Changshui Liu; Qingjun Ma
Journal:  J Biol Chem       Date:  2019-05-09       Impact factor: 5.157

10.  The molecular structure and catalytic mechanism of a novel carboxyl peptidase from Scytalidium lignicolum.

Authors:  Masao Fujinaga; Maia M Cherney; Hiroshi Oyama; Kohei Oda; Michael N G James
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-01       Impact factor: 11.205

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