Literature DB >> 11319027

A potato tuber-expressed mRNA with homology to steroid dehydrogenases affects gibberellin levels and plant development.

C W Bachem1, B Horvath, L Trindade, M Claassens, E Davelaar, W Jordi, R G Visser.   

Abstract

Using cDNA-AFLP RNA fingerprinting throughout potato tuber development, we have isolated a transcript-derived fragment (TDF511) with strong homology to plant steroid dehydrogenases. During in vitro tuberization, the abundance profile of the TDF shows close correlation to the process of tuber formation. However, when tuberization is inhibited by the addition of gibberellins (GAs) to the growth medium, the appearance of TDF511 in the fingerprint is delayed, then steadily increases in intensity during later stages of development. TDF511 was used to isolate the corresponding cDNA (CB12). The DNA and deduced amino-acid sequences of the cDNA show high homology to a fruit-ripening gene from tomato, a series of steroid dehydrogenases, and the maize Ts2 gene. A section of the cDNA was cloned in antisense orientation behind a 35S CaMV promoter and transformed into potato. Transgenic plants expressing the antisense gene showed significantly earlier emergence, an increase in height, and longer tuber shape. In vitro tuberization experiments reveal extended stolon lengths in comparison to the controls. The analysis of endogenous GA levels showed that the transgenic antisense plants have elevated levels of biologically active GAs and their respective precursors. We propose that this gene plays a role in the metabolism of plant-growth substances important for tuber life cycle and plant development.

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Year:  2001        PMID: 11319027     DOI: 10.1046/j.1365-313x.2001.00993.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  10 in total

1.  Identification of early induced genes upon water deficit in potato cell cultures by cDNA-AFLP.

Authors:  Alfredo Ambrosone; Michele Di Giacomo; Antonella Leone; M Stefania Grillo; Antonello Costa
Journal:  J Plant Res       Date:  2012-07-08       Impact factor: 2.629

2.  A transcriptomic approach to identify regulatory genes involved in fruit set of wild-type and parthenocarpic tomato genotypes.

Authors:  Fabrizio Ruiu; Maurizio Enea Picarella; Shunsuke Imanishi; Andrea Mazzucato
Journal:  Plant Mol Biol       Date:  2015-08-30       Impact factor: 4.076

3.  Construction of a potato transcriptome map based on the cDNA-AFLP technique.

Authors:  E Ritter; J I Ruiz de Galarreta; H J van Eck; I Sánchez
Journal:  Theor Appl Genet       Date:  2008-03-04       Impact factor: 5.699

4.  Characterization and RNA-seq analysis of underperformer, an activation-tagged potato mutant.

Authors:  Sukhwinder S Aulakh; Richard E Veilleux; Allan W Dickerman; Guozhu Tang; Barry S Flinn
Journal:  Plant Mol Biol       Date:  2013-12-04       Impact factor: 4.076

5.  Detection of an efficient restriction enzyme combination for cDNA-AFLP analysis in Festuca mairei and evaluation of the identity of transcript-derived fragments.

Authors:  Jianping P Wang; Suleiman S Bughrara
Journal:  Mol Biotechnol       Date:  2005-03       Impact factor: 2.695

6.  Expression analysis of a family of nsLTP genes tissue specifically expressed throughout the plant and during potato tuber life cycle.

Authors:  Beatrix M Horvath; Christian W B Bachem; Luisa M Trindade; Marian E P Oortwijn; Richard G F Visser
Journal:  Plant Physiol       Date:  2002-08       Impact factor: 8.340

7.  Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms.

Authors:  Sigrun Reumann; Lavanya Babujee; Changle Ma; Stephanie Wienkoop; Tanja Siemsen; Gerardo E Antonicelli; Nicolas Rasche; Franziska Lüder; Wolfram Weckwerth; Olaf Jahn
Journal:  Plant Cell       Date:  2007-10-19       Impact factor: 11.277

8.  Mutation in the putative ketoacyl-ACP reductase CaKR1 induces loss of pungency in Capsicum.

Authors:  Sota Koeda; Kosuke Sato; Hiroki Saito; Atsushi J Nagano; Masaki Yasugi; Hiroshi Kudoh; Yoshiyuki Tanaka
Journal:  Theor Appl Genet       Date:  2018-09-28       Impact factor: 5.699

9.  Identification of upregulated genes under cold stress in cold-tolerant chickpea using the cDNA-AFLP approach.

Authors:  Ali Dinari; Ali Niazi; Ali Reza Afsharifar; Amin Ramezani
Journal:  PLoS One       Date:  2013-01-14       Impact factor: 3.240

10.  Integration of multi-omics data for prediction of phenotypic traits using random forest.

Authors:  Animesh Acharjee; Bjorn Kloosterman; Richard G F Visser; Chris Maliepaard
Journal:  BMC Bioinformatics       Date:  2016-06-06       Impact factor: 3.169

  10 in total

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