Literature DB >> 11305926

A fluorescent sensor of the phosphorylation state of nucleoside diphosphate kinase and its use to monitor nucleoside diphosphate concentrations in real time.

M Brune1, J E Corrie, M R Webb.   

Abstract

A sensor for purine nucleoside diphosphates in solution based on nucleoside diphosphate kinase (NDPK) has been developed. A single cysteine was introduced into the protein and labeled with the environmentally sensitive fluorophore, N-[2-(iodoacetamido)ethyl]-7-diethylaminocoumarin-3-carboxamide. The resultant molecule shows a 4-fold fluorescence increase when phosphorylated on His117; this phosphorylation is on the normal reaction pathway of the enzyme. The emission maximum of the phosphoenzyme is at 475 nm, with maximum excitation at 430 nm. The fluorescent phosphorylated NDPK is used to measure the amount of ADP and the unphosphorylated to measure ATP. The labeled protein is phosphorylated to > 90%, and the resultant molecule is stable on ice or can be stored at -80 degrees C. The fluorescence responds to the fraction of protein phosphorylated and so to the equilibrium between ADP plus NDPK approximately P and ATP plus NDPK. In effect, the sensor measures the ADP/ATP concentration ratio. The enzyme has a broad specificity for the purine of the nucleotides, so the sensor also can measure GDP/GTP ratios. The fluorescence and kinetic properties of the labeled protein are described. The binding rate constants of nucleotides are approximately 10(5) M(-1) s(-1), and the fluorescence change is at >200 s(-1) when the ADP concentration is >1 mM. Results are presented with two well-defined systems, namely, the kinetics of ADP release from myosin subfragment 1 and GDP release from the small G protein, human rho. The results obtained with this novel sensor agree with those from alternate methods and demonstrate the applicability for following micromolar changes in nucleoside diphosphate in real time.

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Year:  2001        PMID: 11305926     DOI: 10.1021/bi002484h

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  8 in total

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3.  Time course and strain dependence of ADP release during contraction of permeabilized skeletal muscle fibers.

Authors:  Timothy G West; Gabor Hild; Verl B Siththanandan; Martin R Webb; John E T Corrie; Michael A Ferenczi
Journal:  Biophys J       Date:  2009-04-22       Impact factor: 4.033

4.  Influence of ionic strength on the time course of force development and phosphate release by dogfish muscle fibres.

Authors:  Timothy G West; Michael A Ferenczi; Roger C Woledge; N A Curtin
Journal:  J Physiol       Date:  2005-07-21       Impact factor: 5.182

5.  Fluorescence detection of GDP in real time with the reagentless biosensor rhodamine-ParM.

Authors:  Simone Kunzelmann; Martin R Webb
Journal:  Biochem J       Date:  2011-11-15       Impact factor: 3.857

6.  Discovery of Covalent Inhibitors Targeting the Transcriptional Enhanced Associate Domain Central Pocket.

Authors:  Hacer Karatas; Mohammad Akbarzadeh; Hélène Adihou; Gernot Hahne; Ajaybabu V Pobbati; Elizabeth Yihui Ng; Stéphanie M Guéret; Sonja Sievers; Axel Pahl; Malte Metz; Sarah Zinken; Lara Dötsch; Christine Nowak; Sasikala Thavam; Alexandra Friese; CongBao Kang; Wanjin Hong; Herbert Waldmann
Journal:  J Med Chem       Date:  2020-10-01       Impact factor: 7.446

7.  A biosensor for fluorescent determination of ADP with high time resolution.

Authors:  Simone Kunzelmann; Martin R Webb
Journal:  J Biol Chem       Date:  2009-09-29       Impact factor: 5.157

8.  Coupling of two non-processive myosin 5c dimers enables processive stepping along actin filaments.

Authors:  Laura K Gunther; Ken'ya Furuta; Jianjun Bao; Monica K Urbanowski; Hiroaki Kojima; Howard D White; Takeshi Sakamoto
Journal:  Sci Rep       Date:  2014-05-09       Impact factor: 4.379

  8 in total

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