Literature DB >> 11300785

Iron coordination in photosystem II: interaction between bicarbonate and the QB pocket studied by Fourier transform infrared spectroscopy.

C Berthomieu1, R Hienerwadel.   

Abstract

The non heme iron environment of photosystem II is studied by light-induced infrared spectroscopy. A conclusion of previous work [Hienerwadel, R., and Berthomieu, C. (1995) Biochemistry 34, 16288-16297] is that bicarbonate is a bidendate ligand of the reduced iron and a monodentate ligand in the Fe(3+) state. In this work, the effects of bicarbonate replacement with lactate, glycolate, and glyoxylate, and of o-phenanthroline binding are investigated to determine the specific interactions of bicarbonate with the protein. Fe(2+)/Fe(3+) FTIR spectra recorded with (12)C- and (13)C(1)-labeled lactate indicate that lactate displaces bicarbonate by direct binding to the iron through one carboxylate oxygen and the hydroxyl group in both the Fe(2+) and Fe(3+) states. This different binding mode with respect to bicarbonate could explain the lower midpoint of the iron couple observed in the presence of this anion [Deligiannakis, Y., Petrouleas, V., and Diner, B. A. (1994) Biochim. Biophys. Acta 1188, 260-270]. In agreement with the -60 mV/pH unit dependence of the iron midpoint potential in the presence of bicarbonate, the proton release upon iron oxidation by photosystem II is directly measured to 0.95 +/- 0.05 by the comparison of infrared signals of phosphate buffer and ferrocyanide modes. This accurate method may be applied to the study of other redox reactions in proteins. The pH dependence of the iron couple is proposed to reflect the deprotonation of D1His215, a putative iron ligand located at the Q(B) pocket, since the signal at 1094 cm(-1) assigned to the nu(C-N) mode of a histidinate ligand in the Fe(3+) state is not observed in the presence of o-phenanthroline. Specific regulation of the pK(a) of D1His215 by bicarbonate is inferred from the absence of the band at 1094 cm(-1) in Fe(2+)/Fe(3+) spectra recorded with glycolate, glyoxylate, or lactate. A broad positive continuum, maximum at approximately 2550 cm(-1), observed in the presence of bicarbonate, but absent with o-phenanthroline or lactate, glycolate, and glyoxylate, indicates a hydrogen bond network from the non heme iron toward the Q(B) pocket involving bicarbonate and His D1-215. Proton release of about 1, measured upon iron oxidation at pH 6 with the latter anions, points to a proton release mechanism different from that involved in the presence of bicarbonate.

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Year:  2001        PMID: 11300785     DOI: 10.1021/bi002236l

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  13 in total

Review 1.  Photosystem II: structure and mechanism of the water:plastoquinone oxidoreductase.

Authors:  Jan Kern; Gernot Renger
Journal:  Photosynth Res       Date:  2007-07-17       Impact factor: 3.573

Review 2.  Oxidative photosynthetic water splitting: energetics, kinetics and mechanism.

Authors:  Gernot Renger
Journal:  Photosynth Res       Date:  2007-07-24       Impact factor: 3.573

Review 3.  Proton transfer reactions and hydrogen-bond networks in protein environments.

Authors:  Hiroshi Ishikita; Keisuke Saito
Journal:  J R Soc Interface       Date:  2013-11-27       Impact factor: 4.118

4.  Glycolate Induces Redox Tuning Of Photosystem II in Vivo: Study of a Photorespiration Mutant.

Authors:  Marine Messant; Stefan Timm; Andrea Fantuzzi; Wolfram Weckwerth; Hermann Bauwe; A William Rutherford; Anja Krieger-Liszkay
Journal:  Plant Physiol       Date:  2018-05-23       Impact factor: 8.340

Review 5.  Fourier transform infrared (FTIR) spectroscopy.

Authors:  Catherine Berthomieu; Rainer Hienerwadel
Journal:  Photosynth Res       Date:  2009-06-10       Impact factor: 3.573

6.  Formate binding near the redox-active tyrosineD in photosystem II: consequences on the properties of tyrD.

Authors:  Rainer Hienerwadel; Samuel Gourion-Arsiquaud; Matteo Ballottari; Roberto Bassi; Bruce A Diner; Catherine Berthomieu
Journal:  Photosynth Res       Date:  2005-06       Impact factor: 3.573

7.  pH-sensitive vibrational probe reveals a cytoplasmic protonated cluster in bacteriorhodopsin.

Authors:  Victor A Lorenz-Fonfria; Mattia Saita; Tzvetana Lazarova; Ramona Schlesinger; Joachim Heberle
Journal:  Proc Natl Acad Sci U S A       Date:  2017-12-04       Impact factor: 11.205

8.  Mechanism of proton-coupled quinone reduction in Photosystem II.

Authors:  Keisuke Saito; A William Rutherford; Hiroshi Ishikita
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-31       Impact factor: 11.205

9.  Carboxylate shifts steer interquinone electron transfer in photosynthesis.

Authors:  Petko Chernev; Ivelina Zaharieva; Holger Dau; Michael Haumann
Journal:  J Biol Chem       Date:  2010-12-17       Impact factor: 5.157

10.  Efficiency of photosynthetic water oxidation at ambient and depleted levels of inorganic carbon.

Authors:  Dmitriy Shevela; Birgit Nöring; Sergey Koroidov; Tatiana Shutova; Göran Samuelsson; Johannes Messinger
Journal:  Photosynth Res       Date:  2013-07-05       Impact factor: 3.573

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