Literature DB >> 11287637

Structures of two molluscan hemocyanin genes: significance for gene evolution.

B Lieb1, B Altenhein, J Markl, A Vincent, E van Olden, K E van Holde, K I Miller.   

Abstract

We present here the description of genes coding for molluscan hemocyanins. Two distantly related mollusks, Haliotis tuberculata and Octopus dofleini, were studied. The typical architecture of a molluscan hemocyanin subunit, which is a string of seven or eight globular functional units (FUs, designated a to h, about 50 kDa each), is reflected by the gene organization: a series of eight structurally related coding regions in Haliotis, corresponding to FU-a to FU-h, with seven highly variable linker introns of 174 to 3,198 bp length (all in phase 1). In Octopus seven coding regions (FU-a to FU-g) are found, separated by phase 1 introns varying in length from 100 bp to 910 bp. Both genes exhibit typical signal (export) sequences, and in both cases these are interrupted by an additional intron. Each gene also contains an intron between signal peptide and FU-a and in the 3' untranslated region. Of special relevance for evolutionary considerations are introns interrupting those regions that encode a discrete functional unit. We found that five of the eight FUs in Haliotis each are encoded by a single exon, whereas FU-f, FU-g, and FU-a are encoded by two, three and four exons, respectively. Similarly, in Octopus four of the FUs each correspond to an uninterrupted exon, whereas FU-b, FU-e, and FU-f each contain a single intron. Although the positioning of the introns between FUs is highly conserved in the two mollusks, the introns within FUs show no relationship either in location nor phase. It is proposed that the introns between FUs were generated as the eight-unit polypeptide evolved from a monomeric precursor, and that the internal introns have been added later. A hypothesis for evolution of the ring-like quaternary structure of molluscan hemocyanins is presented.

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Year:  2001        PMID: 11287637      PMCID: PMC31871          DOI: 10.1073/pnas.071049998

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  Subunit organization of the abalone Haliotis tuberculata hemocyanin type 2 (HtH2), and the cDNA sequence encoding its functional units d, e, f, g and h.

Authors:  B Lieb; B Altenhein; R Lehnert; W Gebauer; J Markl
Journal:  Eur J Biochem       Date:  1999-10-01

2.  Origin of a "bridge" intron in the gene for a two-domain globin.

Authors:  Y Naito; C K Riggs; T L Vandergon; A F Riggs
Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-01       Impact factor: 11.205

3.  On the antiquity of introns.

Authors:  W Gilbert; M Marchionni; G McKnight
Journal:  Cell       Date:  1986-07-18       Impact factor: 41.582

4.  Characterization of the gene encoding the hemocyanin subunit e from the tarantula Eurypelma californicum.

Authors:  W Voll; R Voit
Journal:  Proc Natl Acad Sci U S A       Date:  1990-07       Impact factor: 11.205

Review 5.  A survey on intron and exon lengths.

Authors:  J D Hawkins
Journal:  Nucleic Acids Res       Date:  1988-11-11       Impact factor: 16.971

6.  Molecular evolution of the arthropod hemocyanin superfamily.

Authors:  T Burmester
Journal:  Mol Biol Evol       Date:  2001-02       Impact factor: 16.240

7.  The sequence of a gastropod hemocyanin (HtH1 from Haliotis tuberculata).

Authors:  B Lieb; B Altenhein; J Markl
Journal:  J Biol Chem       Date:  2000-02-25       Impact factor: 5.157

8.  Complete sequence of the 24-mer hemocyanin of the tarantula Eurypelma californicum. Structure and intramolecular evolution of the subunits.

Authors:  R Voit; G Feldmaier-Fuchs; T Schweikardt; H Decker; T Burmester
Journal:  J Biol Chem       Date:  2000-12-15       Impact factor: 5.157

9.  Erythrocruorin from the crustacean Caenestheria inopinata. Quaternary structure and arrangement of subunits.

Authors:  E Ilan; M M David; E Daniel
Journal:  Biochemistry       Date:  1981-10-13       Impact factor: 3.162

Review 10.  Cops and robbers: putative evolution of copper oxygen-binding proteins.

Authors:  H Decker; N Terwilliger
Journal:  J Exp Biol       Date:  2000-06       Impact factor: 3.312

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  22 in total

1.  Putative phenoloxidases in the tunicate Ciona intestinalis and the origin of the arthropod hemocyanin superfamily.

Authors:  A Immesberger; T Burmester
Journal:  J Comp Physiol B       Date:  2003-12-11       Impact factor: 2.200

2.  cDNA sequence, protein structure, and evolution of the single hemocyanin from Aplysia californica, an opisthobranch gastropod.

Authors:  Bernhard Lieb; Valesca Boisguérin; Wolfgang Gebauer; Jürgen Markl
Journal:  J Mol Evol       Date:  2004-10       Impact factor: 2.395

3.  The first complete cDNA sequence of the hemocyanin from a bivalve, the protobranch Nucula nucleus.

Authors:  Sandra Bergmann; Jürgen Markl; Bernhard Lieb
Journal:  J Mol Evol       Date:  2007-05-02       Impact factor: 2.395

4.  Red blood with blue-blood ancestry: intriguing structure of a snail hemoglobin.

Authors:  Bernhard Lieb; Konstantina Dimitrova; Hio-Sun Kang; Sabrina Braun; Wolfgang Gebauer; Andreas Martin; Ben Hanelt; Steven A Saenz; Coen M Adema; Jürgen Markl
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-28       Impact factor: 11.205

Review 5.  Copper active sites in biology.

Authors:  Edward I Solomon; David E Heppner; Esther M Johnston; Jake W Ginsbach; Jordi Cirera; Munzarin Qayyum; Matthew T Kieber-Emmons; Christian H Kjaergaard; Ryan G Hadt; Li Tian
Journal:  Chem Rev       Date:  2014-03-03       Impact factor: 60.622

6.  Two different and functional nuclear rDNA genes in the abalone Haliotis tuberculata: tissue differential expression.

Authors:  Alain Van Wormhoudt; Béatrice Gaume; Yvan Le Bras; Valérie Roussel; Sylvain Huchette
Journal:  Genetica       Date:  2011-12-31       Impact factor: 1.082

7.  The hemocyanin from a living fossil, the cephalopod Nautilus pompilius: protein structure, gene organization, and evolution.

Authors:  Sandra Bergmann; Bernhard Lieb; Peter Ruth; Jürgen Markl
Journal:  J Mol Evol       Date:  2006-02-21       Impact factor: 2.395

8.  Cryo-EM structure of a molluscan hemocyanin suggests its allosteric mechanism.

Authors:  Qinfen Zhang; Xinghong Dai; Yao Cong; Junjie Zhang; Dong-Hua Chen; Matthew T Dougherty; Jiangyong Wang; Steven J Ludtke; Michael F Schmid; Wah Chiu
Journal:  Structure       Date:  2013-04-02       Impact factor: 5.006

9.  Molluscan mega-hemocyanin: an ancient oxygen carrier tuned by a ~550 kDa polypeptide.

Authors:  Bernhard Lieb; Wolfgang Gebauer; Christos Gatsogiannis; Frank Depoix; Nadja Hellmann; Myroslaw G Harasewych; Ellen E Strong; Jürgen Markl
Journal:  Front Zool       Date:  2010-05-13       Impact factor: 3.172

10.  A bacteriophage-related chimeric marine virus infecting abalone.

Authors:  Jun Zhuang; Guiqin Cai; Qiying Lin; Zujian Wu; Lianhui Xie
Journal:  PLoS One       Date:  2010-11-05       Impact factor: 3.240

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