Literature DB >> 11283699

Computational studies of gene regulatory networks: in numero molecular biology.

J Hasty1, D McMillen, F Isaacs, J J Collins.   

Abstract

Remarkable progress in genomic research is leading to a complete map of the building blocks of biology. Knowledge of this map is, in turn, setting the stage for a fundamental description of cellular function at the DNA level. Such a description will entail an understanding of gene regulation, in which proteins often regulate their own production or that of other proteins in a complex web of interactions. The implications of the underlying logic of genetic networks are difficult to deduce through experimental techniques alone, and successful approaches will probably involve the union of new experiments and computational modelling techniques.

Mesh:

Substances:

Year:  2001        PMID: 11283699     DOI: 10.1038/35066056

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  134 in total

1.  Octamerization of lambda CI repressor is needed for effective repression of P(RM) and efficient switching from lysogeny.

Authors:  I B Dodd; A J Perkins; D Tsemitsidis; J B Egan
Journal:  Genes Dev       Date:  2001-11-15       Impact factor: 11.361

2.  Stochasticity in transcriptional regulation: origins, consequences, and mathematical representations.

Authors:  T B Kepler; T C Elston
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

3.  Frequency domain analysis of noise in autoregulated gene circuits.

Authors:  Michael L Simpson; Chris D Cox; Gary S Sayler
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-01       Impact factor: 11.205

Review 4.  Thirteen years of building constraint-based in silico models of Escherichia coli.

Authors:  Jennifer L Reed; Bernhard Ø Palsson
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

5.  On schemes of combinatorial transcription logic.

Authors:  Nicolas E Buchler; Ulrich Gerland; Terence Hwa
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-17       Impact factor: 11.205

6.  Fluctuations and slow variables in genetic networks.

Authors:  R Bundschuh; F Hayot; C Jayaprakash
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

7.  Directed evolution of a genetic circuit.

Authors:  Yohei Yokobayashi; Ron Weiss; Frances H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-25       Impact factor: 11.205

8.  Reverse engineering gene networks: integrating genetic perturbations with dynamical modeling.

Authors:  Jesper Tegner; M K Stephen Yeung; Jeff Hasty; James J Collins
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-01       Impact factor: 11.205

9.  The role of certain Post classes in Boolean network models of genetic networks.

Authors:  Ilya Shmulevich; Harri Lähdesmäki; Edward R Dougherty; Jaakko Astola; Wei Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-08       Impact factor: 11.205

10.  Multisite phosphorylation and network dynamics of cyclin-dependent kinase signaling in the eukaryotic cell cycle.

Authors:  Ling Yang; W Robb MacLellan; Zhangang Han; James N Weiss; Zhilin Qu
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.