Literature DB >> 11280968

DNA fingerprint comparison of rainbow trout and RTG-2 cell line using random amplified polymorphic DNA.

C Becerril1, H Acevedo, M Ferrero, F Sanz, A Castaño.   

Abstract

The detection of genotoxic effects using in vitro cell systems can be extremely useful in risk assessment procedures. However, care should be taken in the extrapolation of in vitro results since, amongst other factors, established cell lines may deviate from the genetic characteristics of their species. In this work, the genetic similarities between the RTG-2 cell line and rainbow trout individuals (Oncorhynchus mykiss) from several fish farms have been studied by the RAPD technique. Results show a significant analogy in the band patterns obtained for both systems, up to 73% of the bands composing the fingerprint of the RTG-2 cell line were found in all the individuals analysed. The inter-population similarity index (Lynch, 1990), considering the RTG-2 cell line as a population, gives a value of 0.931 between both systems. The dendrogram constructed from all the individuals, considering the RTG-2 cell line as just another individual of a single population, showed that the genetic structure of the cell line was not different from those of the other individuals tested. The strong genetic similarity of both systems, together with the previously proven capability of the RAPD technique to detect genetic alterations caused in vitro by genotoxic agents, can be very useful in genetic ecotoxicological studies.

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Year:  2001        PMID: 11280968     DOI: 10.1023/a:1008902109692

Source DB:  PubMed          Journal:  Ecotoxicology        ISSN: 0963-9292            Impact factor:   2.823


  20 in total

1.  Detection of mitomycin C-induced genetic damage in fish cells by use of RAPD.

Authors:  C Becerril; M Ferrero; F Sanz; A Castaño
Journal:  Mutagenesis       Date:  1999-09       Impact factor: 3.000

2.  Comparison of ultraviolet-induced genotoxicity detected by random amplified polymorphic DNA with chlorophyll fluorescence and growth in a marine macroalgae, Palmaria palmata.

Authors: 
Journal:  Aquat Toxicol       Date:  2000-08-01       Impact factor: 4.964

Review 3.  Applications of random amplified polymorphic DNA (RAPD) in molecular ecology.

Authors:  H Hadrys; M Balick; B Schierwater
Journal:  Mol Ecol       Date:  1992-05       Impact factor: 6.185

4.  Random amplified polymorphic DNA (RAPD) fingerprints for identification of red meat animal species.

Authors:  M C Koh; C H Lim; S B Chua; S T Chew; S T Phang
Journal:  Meat Sci       Date:  1998-03       Impact factor: 5.209

5.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

6.  Use of DNA fingerprinting to detect genotoxic effects.

Authors:  D Savva
Journal:  Ecotoxicol Environ Saf       Date:  1998-09       Impact factor: 6.291

7.  Characterization of RTG-2 fish cell line by random amplified polymorphic DNA.

Authors:  M Ferrero; A Castaño; A Gonzalez; F Sanz; C Becerril
Journal:  Ecotoxicol Environ Saf       Date:  1998 May-Jun       Impact factor: 6.291

8.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

9.  Application of the RAPD technique in tilapia fish: species and subspecies identification.

Authors:  F Bardakci; D O Skibinski
Journal:  Heredity (Edinb)       Date:  1994-08       Impact factor: 3.821

10.  Detection of mitomycin C-DNA adducts in vivo by 32P-postlabeling: time course for formation and removal of adducts and biochemical modulation.

Authors:  A J Warren; A E Maccubbin; J W Hamilton
Journal:  Cancer Res       Date:  1998-02-01       Impact factor: 12.701

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