Literature DB >> 11279001

Reconstitution of transcription from the human U6 small nuclear RNA promoter with eight recombinant polypeptides and a partially purified RNA polymerase III complex.

S S Chong1, P Hu, N Hernandez.   

Abstract

The human U6 small nuclear (sn) RNA core promoter consists of a proximal sequence element, which recruits the multisubunit factor SNAP(c), and a TATA box, which recruits the TATA box-binding protein, TBP. In addition to SNAP(c) and TBP, transcription from the human U6 promoter requires two well defined factors. The first is hB", a human homologue of the B" subunit of yeast TFIIIB generally required for transcription of RNA polymerase III genes, and the second is hBRFU, one of two human homologues of the yeast TFIIIB subunit BRF specifically required for transcription of U6-type RNA polymerase III promoters. Here, we have partially purified and characterized a RNA polymerase III complex that can direct transcription from the human U6 promoter when combined with recombinant SNAP(c), recombinant TBP, recombinant hB", and recombinant hBRFU. These results open the way to reconstitution of U6 transcription from entirely defined components.

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Year:  2001        PMID: 11279001     DOI: 10.1074/jbc.M100088200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  12 in total

1.  Short hairpin RNAs (shRNAs) induce sequence-specific silencing in mammalian cells.

Authors:  Patrick J Paddison; Amy A Caudy; Emily Bernstein; Gregory J Hannon; Douglas S Conklin
Journal:  Genes Dev       Date:  2002-04-15       Impact factor: 11.361

2.  Multiple, dispersed human U6 small nuclear RNA genes with varied transcriptional efficiencies.

Authors:  Angela M Domitrovich; Gary R Kunkel
Journal:  Nucleic Acids Res       Date:  2003-05-01       Impact factor: 16.971

3.  Structure of the La motif: a winged helix domain mediates RNA binding via a conserved aromatic patch.

Authors:  Gang Dong; Ghadiyaram Chakshusmathi; Sandra L Wolin; Karin M Reinisch
Journal:  EMBO J       Date:  2004-02-19       Impact factor: 11.598

4.  A multiplicity of factors contributes to selective RNA polymerase III occupancy of a subset of RNA polymerase III genes in mouse liver.

Authors:  Donatella Canella; David Bernasconi; Federica Gilardi; Gwendal LeMartelot; Eugenia Migliavacca; Viviane Praz; Pascal Cousin; Mauro Delorenzi; Nouria Hernandez
Journal:  Genome Res       Date:  2012-01-27       Impact factor: 9.043

5.  A role for beta-actin in RNA polymerase III transcription.

Authors:  Ping Hu; Si Wu; Nouria Hernandez
Journal:  Genes Dev       Date:  2004-12-01       Impact factor: 11.361

6.  Phosphorylation of the Saccharomyces cerevisiae La protein does not appear to be required for its functions in tRNA maturation and nascent RNA stabilization.

Authors:  K S Long; T Cedervall; C Walch-Solimena; D A Noe; M J Huddleston; R S Annan; S L Wolin
Journal:  RNA       Date:  2001-11       Impact factor: 4.942

7.  Assembly and isolation of intermediate steps of transcription complexes formed on the human 5S rRNA gene.

Authors:  Stephan Weser; Jana Riemann; Klaus H Seifart; Wolfgang Meissner
Journal:  Nucleic Acids Res       Date:  2003-05-01       Impact factor: 16.971

8.  Characterization of human RNA polymerase III identifies orthologues for Saccharomyces cerevisiae RNA polymerase III subunits.

Authors:  Ping Hu; Si Wu; Yuling Sun; Chih-Chi Yuan; Ryuji Kobayashi; Michael P Myers; Nouria Hernandez
Journal:  Mol Cell Biol       Date:  2002-11       Impact factor: 4.272

9.  Gene duplication and neofunctionalization: POLR3G and POLR3GL.

Authors:  Marianne Renaud; Viviane Praz; Erwann Vieu; Laurence Florens; Michael P Washburn; Philippe l'Hôte; Nouria Hernandez
Journal:  Genome Res       Date:  2013-10-09       Impact factor: 9.043

10.  Quantifying ChIP-seq data: a spiking method providing an internal reference for sample-to-sample normalization.

Authors:  Nicolas Bonhoure; Gergana Bounova; David Bernasconi; Viviane Praz; Fabienne Lammers; Donatella Canella; Ian M Willis; Winship Herr; Nouria Hernandez; Mauro Delorenzi
Journal:  Genome Res       Date:  2014-04-07       Impact factor: 9.043

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