Literature DB >> 11275432

Theoretically-derived molecular descriptors important in human intestinal absorption.

S Agatonovic-Kustrin1, R Beresford, A P Yusof.   

Abstract

A quantitative structure-human intestinal absorption relationship was developed using artificial neural network (ANN) modeling. A set of 86 drug compounds and their experimentally-derived intestinal absorption values used in this study was gathered from the literature and a total of 57 global molecular descriptors, including constitutional, topological, chemical, geometrical and quantum chemical descriptors, calculated for each compound. A supervised network with radial basis transfer function was used to correlate calculated molecular descriptors with experimentally-derived measures of human intestinal absorption. A genetic algorithm was then used to select important molecular descriptors. Intestinal absorption values (IA%) were used as the ANN's output and calculated molecular descriptors as the inputs. The best genetic neural network (GNN) model with 15 input descriptors was chosen, and the significance of the selected descriptors for intestinal absorption examined. Results obtained with the model that was developed indicate that lipophilicity, conformational stability and inter-molecular interactions (polarity, and hydrogen bonding) have the largest impact on intestinal absorption.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11275432     DOI: 10.1016/s0731-7085(00)00492-1

Source DB:  PubMed          Journal:  J Pharm Biomed Anal        ISSN: 0731-7085            Impact factor:   3.935


  7 in total

1.  Caco-2 cell permeability modelling: a neural network coupled genetic algorithm approach.

Authors:  Armida Di Fenza; Giuliano Alagona; Caterina Ghio; Riccardo Leonardi; Alessandro Giolitti; Andrea Madami
Journal:  J Comput Aided Mol Des       Date:  2007-01-30       Impact factor: 3.686

Review 2.  Modeling kinetics of subcellular disposition of chemicals.

Authors:  Stefan Balaz
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

3.  ADME properties evaluation in drug discovery: in silico prediction of blood-brain partitioning.

Authors:  Lu Zhu; Junnan Zhao; Yanmin Zhang; Weineng Zhou; Linfeng Yin; Yuchen Wang; Yuanrong Fan; Yadong Chen; Haichun Liu
Journal:  Mol Divers       Date:  2018-08-06       Impact factor: 2.943

4.  In Silico Prediction of Intestinal Permeability by Hierarchical Support Vector Regression.

Authors:  Ming-Han Lee; Giang Huong Ta; Ching-Feng Weng; Max K Leong
Journal:  Int J Mol Sci       Date:  2020-05-19       Impact factor: 5.923

5.  Development of a Hierarchical Support Vector Regression-Based In Silico Model for Caco-2 Permeability.

Authors:  Giang Huong Ta; Cin-Syong Jhang; Ching-Feng Weng; Max K Leong
Journal:  Pharmaceutics       Date:  2021-01-28       Impact factor: 6.321

6.  Prediction of human intestinal absorption by GA feature selection and support vector machine regression.

Authors:  Aixia Yan; Zhi Wang; Zongyuan Cai
Journal:  Int J Mol Sci       Date:  2008-10-20       Impact factor: 5.923

7.  Predicting the impacts of mutations on protein-ligand binding affinity based on molecular dynamics simulations and machine learning methods.

Authors:  Debby D Wang; Le Ou-Yang; Haoran Xie; Mengxu Zhu; Hong Yan
Journal:  Comput Struct Biotechnol J       Date:  2020-02-20       Impact factor: 7.271

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.