Literature DB >> 11274112

Cytoplasmic RNA Polymerase in Escherichia coli.

N Shepherd1, P Dennis, H Bremer.   

Abstract

To obtain an estimate for the concentration of free functional RNA polymerase in the bacterial cytoplasm, the content of RNA polymerase beta and beta' subunits in DNA-free minicells from the minicell-producing Escherichia coli strain chi925 was determined. In bacteria grown in Luria-Bertani medium at 2.5 doublings/h, 1.0% of the total protein was RNA polymerase. The concentration of cytoplasmic RNA polymerase beta and beta' subunits in minicells produced by this strain corresponded to about 17% (or 2.5 microM) of the value found in whole cells. Literature data suggest that a similar portion of cytoplasmic RNA polymerase subunits is in RNA polymerase assembly intermediates and imply that free functional RNA polymerase can form a small percentage of the total functional enzyme in the cell. On infection with bacteriophage T7, 20% of the minicells produced progeny phage, whereas infection in 80% of the cells was abortive. RNA polymerase subunits in lysozyme-freeze-thaw lysates of minicells were associated with minicell envelopes and were without detectable activity in an in vitro transcription assay. Together, these results suggest that most functional RNA polymerase is associated with the DNA and that little if any segregates into DNA-free minicells.

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Year:  2001        PMID: 11274112      PMCID: PMC95169          DOI: 10.1128/JB.183.8.2527-2534.2001

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  35 in total

1.  Biosynthesis of RNA polymerase in Escherichia coli. III. Identification of intermediates in the assembly of RNA polymerase.

Authors:  K Ito; Y Iwakura; A Ishihama
Journal:  J Mol Biol       Date:  1975-08-05       Impact factor: 5.469

2.  Factor stimulating transcription by RNA polymerase.

Authors:  R R Burgess; A A Travers; J J Dunn; E K Bautz
Journal:  Nature       Date:  1969-01-04       Impact factor: 49.962

3.  Synthesis and activity of ribonucleic acid polymerase in Escherichia coli.

Authors:  N S Shepherd; G Churchward; H Bremer
Journal:  J Bacteriol       Date:  1980-03       Impact factor: 3.490

4.  Biosynthesis of RNA polymerase in Escherichia coli. II. control of RNA polymerase synthesis during nutritional shift up and down.

Authors:  Y Iwakura; A Ishihama
Journal:  Mol Gen Genet       Date:  1975-12-23

5.  Transcription of plasmid DNA in Escherichia coli minicells.

Authors:  J H Crooks; M Ullman; M Zoller; S B Levy
Journal:  Plasmid       Date:  1983-07       Impact factor: 3.466

6.  Transcription in bacteria at different DNA concentrations.

Authors:  G Churchward; H Bremer; R Young
Journal:  J Bacteriol       Date:  1982-05       Impact factor: 3.490

7.  Control of rRNA synthesis in Escherichia coli at increased rrn gene dosage. Role of guanosine tetraphosphate and ribosome feedback.

Authors:  E Baracchini; H Bremer
Journal:  J Biol Chem       Date:  1991-06-25       Impact factor: 5.157

8.  Polyuridylic acid-directed phenylalanine incorporation in minicell extracts.

Authors:  J A Fralick; W D Fisher; H I Adler
Journal:  J Bacteriol       Date:  1969-08       Impact factor: 3.490

9.  Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA.

Authors:  S N Cohen; A C Chang; L Hsu
Journal:  Proc Natl Acad Sci U S A       Date:  1972-08       Impact factor: 11.205

10.  Circular R-factor molecules controlling penicillinase synthesis, replicating in Escherichia coli under either relaxed or stringent control.

Authors:  P Kontomichalou; M Mitani; R C Clowes
Journal:  J Bacteriol       Date:  1970-10       Impact factor: 3.490

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  25 in total

1.  Function of plastid sigma factors in higher plants: regulation of gene expression or just preservation of constitutive transcription?

Authors:  Silva Lerbs-Mache
Journal:  Plant Mol Biol       Date:  2010-11-25       Impact factor: 4.076

Review 2.  Minicells, Back in Fashion.

Authors:  Madeline M Farley; Bo Hu; William Margolin; Jun Liu
Journal:  J Bacteriol       Date:  2016-03-31       Impact factor: 3.490

Review 3.  Control of rRNA synthesis in Escherichia coli: a systems biology approach.

Authors:  Patrick P Dennis; Mans Ehrenberg; Hans Bremer
Journal:  Microbiol Mol Biol Rev       Date:  2004-12       Impact factor: 11.056

4.  Insights into transcriptional regulation and sigma competition from an equilibrium model of RNA polymerase binding to DNA.

Authors:  Irina L Grigorova; Naum J Phleger; Vivek K Mutalik; Carol A Gross
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-27       Impact factor: 11.205

5.  A superresolution census of RNA polymerase.

Authors:  Stefan Klumpp
Journal:  Biophys J       Date:  2013-12-17       Impact factor: 4.033

6.  Partitioning of RNA polymerase activity in live Escherichia coli from analysis of single-molecule diffusive trajectories.

Authors:  Somenath Bakshi; Renée M Dalrymple; Wenting Li; Heejun Choi; James C Weisshaar
Journal:  Biophys J       Date:  2013-12-17       Impact factor: 4.033

7.  Multiscale spatial organization of RNA polymerase in Escherichia coli.

Authors:  Ulrike Endesfelder; Kieran Finan; Seamus J Holden; Peter R Cook; Achillefs N Kapanidis; Mike Heilemann
Journal:  Biophys J       Date:  2013-07-02       Impact factor: 4.033

8.  High-affinity quasi-specific sites in the genome: how the DNA-binding proteins cope with them.

Authors:  J Chakrabarti; Navin Chandra; Paromita Raha; Siddhartha Roy
Journal:  Biophys J       Date:  2011-09-07       Impact factor: 4.033

9.  Spatial distribution and diffusive motion of RNA polymerase in live Escherichia coli.

Authors:  Benjamin P Bratton; Rachel A Mooney; James C Weisshaar
Journal:  J Bacteriol       Date:  2011-07-22       Impact factor: 3.490

10.  Growth-rate-dependent partitioning of RNA polymerases in bacteria.

Authors:  Stefan Klumpp; Terence Hwa
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-10       Impact factor: 11.205

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