Literature DB >> 11268089

Fluorescence Detection of Specific RNA Sequences Using 2'-Pyrene-Modified Oligoribonucleotides We are very grateful to Professor Hiroshi Sugiyama, Dr. Tetsuji Yamaoka, and Dr. Takashi Morii for ion-spray mass spectrometric measurements and helpful comments on this research.

Kazushige Yamana1, Hirofumi Zako, Kentarou Asazuma, Reiko Iwase, Hidehiko Nakano, Akira Murakami.   

Abstract

Entities:  

Year:  2001        PMID： 11268089     DOI： 10.1002/1521-3773(20010316)40:6<1104::aid-anie11040>3.0.co;2-2

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


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  10 in total

1.  MagiProbe: a novel fluorescence quenching-based oligonucleotide probe carrying a fluorophore and an intercalator.

Authors:  Akio Yamane
Journal:  Nucleic Acids Res       Date:  2002-10-01       Impact factor: 16.971

Review 2.  Pyrene-functionalized oligonucleotides and locked nucleic acids (LNAs): tools for fundamental research, diagnostics, and nanotechnology.

Authors:  Michael E Østergaard; Patrick J Hrdlicka
Journal:  Chem Soc Rev       Date:  2011-04-13       Impact factor: 54.564

Review 3.  25 years and still going strong: 2'-O-(pyren-1-yl)methylribonucleotides - versatile building blocks for applications in molecular biology, diagnostics and materials science.

Authors:  Patrick J Hrdlicka; Saswata Karmakar
Journal:  Org Biomol Chem       Date:  2017-11-29       Impact factor: 3.876

4.  Synthesis and characterization of oligodeoxyribonucleotides modified with 2'-thio-2'-deoxy-2'-S-(pyren-1-yl)methyluridine.

Authors:  Brooke A Anderson; Patrick J Hrdlicka
Journal:  Bioorg Med Chem Lett       Date:  2015-07-07       Impact factor: 2.823

5.  DNA strands with alternating incorporations of LNA and 2'-O-(pyren-1-yl)methyluridine: SNP-discriminating RNA detection probes.

Authors:  Saswata Karmakar; Patrick J Hrdlicka
Journal:  Chem Sci       Date:  2013-09-01       Impact factor: 9.825

6.  Pyrene is highly emissive when attached to the RNA duplex but not to the DNA duplex: the structural basis of this difference.

Authors:  Mitsunobu Nakamura; Yudai Fukunaga; Kazuhiro Sasa; Yukinori Ohtoshi; Kenji Kanaori; Haruhisa Hayashi; Hidehiko Nakano; Kazushige Yamana
Journal:  Nucleic Acids Res       Date:  2005-10-19       Impact factor: 16.971

Review 7.  Recent Advances in Nucleic Acid Targeting Probes and Supramolecular Constructs Based on Pyrene-Modified Oligonucleotides.

Authors:  Olga A Krasheninina; Darya S Novopashina; Evgeny K Apartsin; Alya G Venyaminova
Journal:  Molecules       Date:  2017-11-30       Impact factor: 4.411

8.  Methyl Viologens of Bis-(4'-Pyridylethynyl)Arenes - Structures, Photophysical and Electrochemical Studies, and their Potential Application in Biology.

Authors:  Goutam Kumar Kole; Marta Košćak; Anissa Amar; Dragomira Majhen; Ksenija Božinović; Zlatko Brkljaca; Matthias Ferger; Evripidis Michail; Sabine Lorenzen; Alexandra Friedrich; Ivo Krummenacher; Michael Moos; Holger Braunschweig; Abdou Boucekkine; Christoph Lambert; Jean-François Halet; Ivo Piantanida; Klaus Müller-Buschbaum; Todd B Marder
Journal:  Chemistry       Date:  2022-05-30       Impact factor: 5.020

9.  Synthesis and biophysical properties of C5-functionalized LNA (locked nucleic acid).

Authors:  Pawan Kumar; Michael E Østergaard; Bharat Baral; Brooke A Anderson; Dale C Guenther; Mamta Kaura; Daniel J Raible; Pawan K Sharma; Patrick J Hrdlicka
Journal:  J Org Chem       Date:  2014-05-13       Impact factor: 4.354

10.  Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides.

Authors:  Matic Kovačič; Peter Podbevšek; Hisae Tateishi-Karimata; Shuntaro Takahashi; Naoki Sugimoto; Janez Plavec
Journal:  Nucleic Acids Res       Date:  2020-04-17       Impact factor: 16.971
  10 in total

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