Literature DB >> 11260475

An adenosyl-cobalamin (coenzyme-B12)-repressed translational enhancer in the cob mRNA of Salmonella typhimurium.

S Ravnum1, D I Andersson.   

Abstract

Expression of the cobalamin (Cbl) biosynthetic cob operon in Salmonella typhimurium is repressed by the end-product. This regulation is conferred mainly at the translational level and involves a cobalamin-induced folding of an RNA hairpin that sequesters the ribosomal binding site (RBS) of the cob mRNA and prevents translation initiation. A combined structural and mutational analysis shows that a cis-acting translational enhancer (TE) element, located 83 nucleotides upstream of the Shine-Dalgarno sequence in the 5'-untranslated region (5'-UTR) of the cob mRNA, is required to unfold the inhibitory RBS hairpin in the absence of cobalamin. The TE element, which consists of 5 nucleotides, is proposed to confer its enhancer function in the absence of cobalamin by interacting with nucleotides in the stem of the RBS hairpin. This interaction destabilizes the RNA hairpin and allows ribosome binding. In the presence of cobalamin, the enhancer function is inhibited. As a result, the RBS hairpin forms and prevents translation initiation. Several additional RNA hairpins in the 5'-UTR were also identified and are suggested to be important for repression. The above data suggest that normal cobalamin repression of the cob operon requires that the 5'-UTR has a defined secondary and tertiary structure.

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Year:  2001        PMID: 11260475     DOI: 10.1046/j.1365-2958.2001.02346.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  18 in total

1.  Do mRNAs act as direct sensors of small molecules to control their expression?

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Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-14       Impact factor: 11.205

Review 2.  Toward reprogramming bacteria with small molecules and RNA.

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3.  Thermotoga lettingae can salvage cobinamide to synthesize vitamin B12.

Authors:  Nicholas C Butzin; Michael A Secinaro; Kristen S Swithers; J Peter Gogarten; Kenneth M Noll
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4.  Consistent global structures of complex RNA states through multidimensional chemical mapping.

Authors:  Clarence Yu Cheng; Fang-Chieh Chou; Wipapat Kladwang; Siqi Tian; Pablo Cordero; Rhiju Das
Journal:  Elife       Date:  2015-06-02       Impact factor: 8.140

5.  An ABC-type cobalt transport system is essential for growth of Sinorhizobium meliloti at trace metal concentrations.

Authors:  Jiujun Cheng; Branislava Poduska; Richard A Morton; Turlough M Finan
Journal:  J Bacteriol       Date:  2011-07-01       Impact factor: 3.490

6.  Structural insights into ligand binding and gene expression control by an adenosylcobalamin riboswitch.

Authors:  Alla Peselis; Alexander Serganov
Journal:  Nat Struct Mol Biol       Date:  2012-10-14       Impact factor: 15.369

7.  A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria.

Authors:  J Miranda-Ríos; M Navarro; M Soberón
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-24       Impact factor: 11.205

8.  Secondary structural entropy in RNA switch (Riboswitch) identification.

Authors:  Amirhossein Manzourolajdad; Jonathan Arnold
Journal:  BMC Bioinformatics       Date:  2015-04-28       Impact factor: 3.169

Review 9.  A decade of riboswitches.

Authors:  Alexander Serganov; Evgeny Nudler
Journal:  Cell       Date:  2013-01-17       Impact factor: 41.582

10.  Coenzyme B12 controls transcription of the Streptomyces class Ia ribonucleotide reductase nrdABS operon via a riboswitch mechanism.

Authors:  Ilya Borovok; Batia Gorovitz; Rachel Schreiber; Yair Aharonowitz; Gerald Cohen
Journal:  J Bacteriol       Date:  2006-04       Impact factor: 3.490

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