Literature DB >> 11252717

The final cut. The importance of tRNA 3'-processing.

M Mörl1, A Marchfelder.   

Abstract

To generate functional tRNA molecules, precursor RNAs must undergo several processing steps. While the enzyme that generates the mature tRNA 5'-end, RNase P, has been thoroughly investigated, the 3'-processing activity is, despite its importance, less understood. While nothing is known about tRNA 3'-processing in archaea, the phenomenon has been analysed in detail in bacteria and is known to be a multistep process involving several enzymes, including both exo- and endonucleases. tRNA 3'-end processing in the eukaryotic nucleus seems to be either exonucleolytic or endonucleolytic, depending on the organism analysed, whereas in organelles, 3'-end maturation occurs via a single endonucleolytic cut. An interesting feature of organellar tRNA 3'-processing is the occurrence of overlapping tRNA genes in metazoan mitochondria, which presents a unique challenge for the mitochondrial tRNA maturation enzymes, since it requires not only the removal but also the addition of nucleotides by an editing reaction.

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Year:  2001        PMID: 11252717      PMCID: PMC1083803          DOI: 10.1093/embo-reports/kve006

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  33 in total

1.  tRNA 3' processing in plants: nuclear and mitochondrial activities differ.

Authors:  M Mayer; S Schiffer; A Marchfelder
Journal:  Biochemistry       Date:  2000-02-29       Impact factor: 3.162

Review 2.  Ribonucleases, tRNA nucleotidyltransferase, and the 3' processing of tRNA.

Authors:  M P Deutscher
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1990

3.  Biosynthesis of tRNA in yeast mitochondria. An endonuclease is responsible for the 3'-processing of tRNA precursors.

Authors:  J Y Chen; N C Martin
Journal:  J Biol Chem       Date:  1988-09-25       Impact factor: 5.157

4.  Separation and characterization of 5'- and 3'-tRNA processing nucleases from rat liver mitochondria.

Authors:  S Manam; G C Van Tuyle
Journal:  J Biol Chem       Date:  1987-07-25       Impact factor: 5.157

5.  RNAase P is dependent on RNAase E action in processing monomeric RNA precursors that accumulate in an RNAase E- mutant of Escherichia coli.

Authors:  B K Ray; D Apirion
Journal:  J Mol Biol       Date:  1981-07-15       Impact factor: 5.469

6.  Transfer RNA precursors are accumulated in Escherichia coli in the absence of RNase E.

Authors:  B K Ray; D Apirion
Journal:  Eur J Biochem       Date:  1981-03

Review 7.  RNA processing in a unicellular microorganism: implications for eukaryotic cells.

Authors:  D Apirion
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1983

8.  Total synthesis of a tyrosine suppressor transfer RNA gene. XVII. Transcription, in vitro, of the synthetic gene and processing of the primary transcript to transfer RNA.

Authors:  T Sekiya; R Contreras; T Takeya; H G Khorana
Journal:  J Biol Chem       Date:  1979-07-10       Impact factor: 5.157

9.  An archaebacterial cell-free transcription system. The expression of tRNA genes from Methanococcus vannielii is mediated by a transcription factor.

Authors:  G Frey; M Thomm; B Brüdigam; H P Gohl; W Hausner
Journal:  Nucleic Acids Res       Date:  1990-03-25       Impact factor: 16.971

10.  A set of tRNAs that lack either the T psi C arm or the dihydrouridine arm: towards a minimal tRNA adaptor.

Authors:  R Okimoto; D R Wolstenholme
Journal:  EMBO J       Date:  1990-10       Impact factor: 11.598

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  41 in total

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Authors:  Taijiao Jiang; Sidney Altman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-02       Impact factor: 11.205

2.  Pathology-related substitutions in human mitochondrial tRNA(Ile) reduce precursor 3' end processing efficiency in vitro.

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Journal:  Nucleic Acids Res       Date:  2003-04-01       Impact factor: 16.971

3.  A third lineage with two-piece tmRNA.

Authors:  Stephen M Sharkady; Kelly P Williams
Journal:  Nucleic Acids Res       Date:  2004-08-23       Impact factor: 16.971

4.  LocARNA-P: accurate boundary prediction and improved detection of structural RNAs.

Authors:  Sebastian Will; Tejal Joshi; Ivo L Hofacker; Peter F Stadler; Rolf Backofen
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Review 5.  Lipoic acid metabolism in microbial pathogens.

Authors:  Maroya D Spalding; Sean T Prigge
Journal:  Microbiol Mol Biol Rev       Date:  2010-06       Impact factor: 11.056

6.  The structure of the flexible arm of Thermotoga maritima tRNase Z differs from those of homologous enzymes.

Authors:  Ryohei Ishii; Asako Minagawa; Hiroaki Takaku; Masamichi Takagi; Masayuki Nashimoto; Shigeyuki Yokoyama
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-07-21

7.  Residues in two homology blocks on the amino side of the tRNase Z His domain contribute unexpectedly to pre-tRNA 3' end processing.

Authors:  Neela Zareen; Angela Hopkinson; Louis Levinger
Journal:  RNA       Date:  2006-04-17       Impact factor: 4.942

Review 8.  RNA recognition by 3'-to-5' exonucleases: the substrate perspective.

Authors:  Hend Ibrahim; Jeffrey Wilusz; Carol J Wilusz
Journal:  Biochim Biophys Acta       Date:  2007-12-03

9.  Top-down tandem mass spectrometry of tRNA via ion trap collision-induced dissociation.

Authors:  Teng-Yi Huang; Jian Liu; Scott A McLuckey
Journal:  J Am Soc Mass Spectrom       Date:  2009-12-28       Impact factor: 3.109

10.  Long transcripts from dinoflagellate chloroplast minicircles suggest "rolling circle" transcription.

Authors:  Yunkun Dang; Beverley R Green
Journal:  J Biol Chem       Date:  2009-11-30       Impact factor: 5.157

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