Literature DB >> 11246466

Microsatellite evolution in modern humans: a comparison of two data sets from the same populations.

L Jin1, M L Baskett, L L Cavalli-Sforza, L A Zhivotovsky, M W Feldman, N A Rosenberg.   

Abstract

We genotyped 64 dinucleotide microsatellite repeats in individuals from populations that represent all inhabited continents. Microsatellite summary statistics are reported for these data, as well as for a data set that includes 28 out of 30 loci studied by Bowcock et al. (1994) in the same individuals. For both data sets, diversity statistics such as heterozygosity, number of alleles per locus, and number of private alleles per locus produced the highest values in Africans, intermediate values in Europeans and Asians, and low values in Americans. Evolutionary trees of populations based on genetic distances separated groups from different continents. Corresponding trees were topologically similar for the two data sets, with the exception that the (deltamu)2 genetic distance reliably distinguished groups from different continents for the larger data set, but not for the smaller one. Consistent with our results from diversity statistics and from evolutionary trees, population growth statistics S k and beta, which seem particularly useful for indicating recent and ancient population size changes, confirm a model of human evolution in which human populations expand in size and through space following the departure of a small group from Africa.

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Year:  2000        PMID: 11246466     DOI: 10.1017/S0003480000008034

Source DB:  PubMed          Journal:  Ann Hum Genet        ISSN: 0003-4800            Impact factor:   1.670


  13 in total

1.  Distinctive genetic signatures in the Libyan Jews.

Authors:  N A Rosenberg; E Woolf; J K Pritchard; T Schaap; D Gefel; I Shpirer; U Lavi; B Bonne-Tamir; J Hillel; M W Feldman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-30       Impact factor: 11.205

2.  Empirical evaluation of genetic clustering methods using multilocus genotypes from 20 chicken breeds.

Authors:  N A Rosenberg; T Burke; K Elo; M W Feldman; P J Freidlin; M A Groenen; J Hillel; A Mäki-Tanila; M Tixier-Boichard; A Vignal; K Wimmers; S Weigend
Journal:  Genetics       Date:  2001-10       Impact factor: 4.562

3.  Deciphering diversity in populations of various linguistic and ethnic affiliations of different geographical regions of India: analysis based on 15 microsatellite markers.

Authors:  V K Kashyap; Richa Ashma; Sonali Gaikwad; B N Sarkar; R Trivedi
Journal:  J Genet       Date:  2004-04       Impact factor: 1.166

4.  A consensus tree approach for reconstructing human evolutionary history and detecting population substructure.

Authors:  Ming-Chi Tsai; Guy Blelloch; R Ravi; Russell Schwartz
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2011 Jul-Aug       Impact factor: 3.710

5.  Formulating a historical and demographic model of recent human evolution based on resequencing data from noncoding regions.

Authors:  Guillaume Laval; Etienne Patin; Luis B Barreiro; Lluís Quintana-Murci
Journal:  PLoS One       Date:  2010-04-22       Impact factor: 3.240

6.  Genetic variation and population structure in native Americans.

Authors:  Sijia Wang; Cecil M Lewis; Mattias Jakobsson; Sohini Ramachandran; Nicolas Ray; Gabriel Bedoya; Winston Rojas; Maria V Parra; Julio A Molina; Carla Gallo; Guido Mazzotti; Giovanni Poletti; Kim Hill; Ana M Hurtado; Damian Labuda; William Klitz; Ramiro Barrantes; Maria Cátira Bortolini; Francisco M Salzano; Maria Luiza Petzl-Erler; Luiza T Tsuneto; Elena Llop; Francisco Rothhammer; Laurent Excoffier; Marcus W Feldman; Noah A Rosenberg; Andrés Ruiz-Linares
Journal:  PLoS Genet       Date:  2007-11       Impact factor: 5.917

7.  Features of evolution and expansion of modern humans, inferred from genomewide microsatellite markers.

Authors:  Lev A Zhivotovsky; Noah A Rosenberg; Marcus W Feldman
Journal:  Am J Hum Genet       Date:  2003-04-10       Impact factor: 11.025

8.  DNA sequence variation in a 3.7-kb noncoding sequence 5' of the CYP1A2 gene: implications for human population history and natural selection.

Authors:  S P Wooding; W S Watkins; M J Bamshad; D M Dunn; R B Weiss; L B Jorde
Journal:  Am J Hum Genet       Date:  2002-08-09       Impact factor: 11.025

9.  Genetic variation among world populations: inferences from 100 Alu insertion polymorphisms.

Authors:  W Scott Watkins; Alan R Rogers; Christopher T Ostler; Steve Wooding; Michael J Bamshad; Anna-Marie E Brassington; Marion L Carroll; Son V Nguyen; Jerilyn A Walker; B V Ravi Prasad; P Govinda Reddy; Pradipta K Das; Mark A Batzer; Lynn B Jorde
Journal:  Genome Res       Date:  2003-06-12       Impact factor: 9.043

10.  FRANz: reconstruction of wild multi-generation pedigrees.

Authors:  Markus Riester; Peter F Stadler; Konstantin Klemm
Journal:  Bioinformatics       Date:  2009-02-08       Impact factor: 6.937

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