Literature DB >> 11244106

Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. Tagging of a zeaxanthin epoxidase gene and a novel ostatc gene.

G K Agrawal1, M Yamazaki, M Kobayashi, R Hirochika, A Miyao, H Hirochika.   

Abstract

The rice (Oryza sativa) retrotransposon Tos17 is one of a few active retrotransposons in plants and its transposition is activated by tissue culture. Here, we present the characterization of viviparous mutants of rice induced by tissue culture to demonstrate the feasibility of the use of retrotransposon Tos17 as an endogenous insertional mutagen and cloning of the tagged gene for forward genetics in unraveling the gene function. Two mutants were shown to be caused by the insertion of Tos17. Osaba1, a strong viviparous mutant with wilty phenotype, displayed low abscisic acid level and almost no further increase in its levels upon drought. The mutant is shown to be impaired in the epoxidation of zeaxanthin. On the other hand, Ostatc, a mutant with weak phenotype, exhibited the pale green phenotype and slight increase in abscisic acid levels upon drought. Deduced amino acids of the causative genes of Osaba1 and Ostatc manifested a significantly high homology with zeaxanthin epoxidase isolated from other plant species and with bacterial Sec-independent translocase TATC protein, respectively. This is the first example of transposon tagging in rice.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11244106      PMCID: PMC65605          DOI: 10.1104/pp.125.3.1248

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  28 in total

1.  The rice retrotransposon Tos17 prefers low-copy-number sequences as integration targets.

Authors:  M Yamazaki; H Tsugawa; A Miyao; M Yano; J Wu; S Yamamoto; T Matsumoto; T Sasaki; H Hirochika
Journal:  Mol Genet Genomics       Date:  2001-04       Impact factor: 3.291

2.  COPPER ENZYMES IN ISOLATED CHLOROPLASTS. POLYPHENOLOXIDASE IN BETA VULGARIS.

Authors:  D I Arnon
Journal:  Plant Physiol       Date:  1949-01       Impact factor: 8.340

3.  A procedure for in vitro amplification of DNA segments that lie outside the boundaries of known sequences.

Authors:  T Triglia; M G Peterson; D J Kemp
Journal:  Nucleic Acids Res       Date:  1988-08-25       Impact factor: 16.971

4.  Specific oxidative cleavage of carotenoids by VP14 of maize.

Authors:  S H Schwartz; B C Tan; D A Gage; J A Zeevaart; D R McCarty
Journal:  Science       Date:  1997-06-20       Impact factor: 47.728

5.  Characterization of the ABA-deficient tomato mutant notabilis and its relationship with maize Vp14.

Authors:  A Burbidge; T M Grieve; A Jackson; A Thompson; D R McCarty; I B Taylor
Journal:  Plant J       Date:  1999-02       Impact factor: 6.417

6.  Genomic sequencing.

Authors:  G M Church; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1984-04       Impact factor: 11.205

7.  Molecular identification of zeaxanthin epoxidase of Nicotiana plumbaginifolia, a gene involved in abscisic acid biosynthesis and corresponding to the ABA locus of Arabidopsis thaliana.

Authors:  E Marin; L Nussaume; A Quesada; M Gonneau; B Sotta; P Hugueney; A Frey; A Marion-Poll
Journal:  EMBO J       Date:  1996-05-15       Impact factor: 11.598

8.  Loss-of-function mutations in the rice homeobox gene OSH15 affect the architecture of internodes resulting in dwarf plants.

Authors:  Y Sato; N Sentoku; Y Miura; H Hirochika; H Kitano; M Matsuoka
Journal:  EMBO J       Date:  1999-02-15       Impact factor: 11.598

9.  The maize transposable element system Ac/Ds as a mutagen in Arabidopsis: identification of an albino mutation induced by Ds insertion.

Authors:  D Long; M Martin; E Sundberg; J Swinburne; P Puangsomlee; G Coupland
Journal:  Proc Natl Acad Sci U S A       Date:  1993-11-01       Impact factor: 11.205

10.  Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes.

Authors:  E Wisman; U Hartmann; M Sagasser; E Baumann; K Palme; K Hahlbrock; H Saedler; B Weisshaar
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-13       Impact factor: 11.205

View more
  66 in total

1.  Isolation and characterization of genomic and transcribed retrotransposon sequences from sorghum.

Authors:  B Muthukumar; J L Bennetzen
Journal:  Mol Genet Genomics       Date:  2004-02-04       Impact factor: 3.291

2.  Target site specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon-rich regions of the genome.

Authors:  Akio Miyao; Katsuyuki Tanaka; Kazumasa Murata; Hiromichi Sawaki; Shin Takeda; Kiyomi Abe; Yoriko Shinozuka; Katsura Onosato; Hirohiko Hirochika
Journal:  Plant Cell       Date:  2003-08       Impact factor: 11.277

Review 3.  Recent progress in the understanding of tissue culture-induced genome level changes in plants and potential applications.

Authors:  Anjanasree K Neelakandan; Kan Wang
Journal:  Plant Cell Rep       Date:  2011-12-17       Impact factor: 4.570

4.  Abscisic Acid biosynthesis and response.

Authors:  Ruth R Finkelstein; Christopher D Rock
Journal:  Arabidopsis Book       Date:  2002-09-30

5.  Isolation, fine mapping and expression profiling of a lesion mimic genotype, spl(NF4050-8) that confers blast resistance in rice.

Authors:  Raman Babu; Chang-Jie Jiang; Xin Xu; Kameswara Rao Kottapalli; Hiroshi Takatsuji; Akio Miyao; Hirohiko Hirochika; Shinji Kawasaki
Journal:  Theor Appl Genet       Date:  2010-12-04       Impact factor: 5.699

6.  Association between seed dormancy and pericarp color is controlled by a pleiotropic gene that regulates abscisic acid and flavonoid synthesis in weedy red rice.

Authors:  Xing-You Gu; Michael E Foley; David P Horvath; James V Anderson; Jiuhuan Feng; Lihua Zhang; Chase R Mowry; Heng Ye; Jeffrey C Suttle; Koh-ichi Kadowaki; Zongxiang Chen
Journal:  Genetics       Date:  2011-09-27       Impact factor: 4.562

7.  Abscisic acid regulates pinoresinol-lariciresinol reductase gene expression and secoisolariciresinol accumulation in developing flax (Linum usitatissimum L.) seeds.

Authors:  Sullivan Renouard; Cyrielle Corbin; Tatiana Lopez; Josiane Montguillon; Laurent Gutierrez; Frédéric Lamblin; Eric Lainé; Christophe Hano
Journal:  Planta       Date:  2011-08-12       Impact factor: 4.116

8.  Cloning and functional validation of molybdenum cofactor sulfurase gene from Ammopiptanthus nanus.

Authors:  Hao Qiang Yu; Yuan Yuan Zhang; Tai Ming Yong; Yan Ping Liu; Shu Feng Zhou; Feng Ling Fu; Wan Chen Li
Journal:  Plant Cell Rep       Date:  2015-02-27       Impact factor: 4.570

9.  The Rice PIPELINE: a unification tool for plant functional genomics.

Authors:  Junshi Yazaki; Keiichi Kojima; Kouji Suzuki; Naoki Kishimoto; Shoshi Kikuchi
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

10.  Three distinct rice cellulose synthase catalytic subunit genes required for cellulose synthesis in the secondary wall.

Authors:  Katsuyuki Tanaka; Kazumasa Murata; Muneo Yamazaki; Katsura Onosato; Akio Miyao; Hirohiko Hirochika
Journal:  Plant Physiol       Date:  2003-09       Impact factor: 8.340

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.