Literature DB >> 11241213

Liposome-assisted selective polycondensation of alpha-amino acids and peptides.

T Hitz1, P L Luisi.   

Abstract

The main question of this paper is whether and to what extend lipid bilayers can aid in the polycondensation of amino acids and peptides. This means in particular how such bilayers can favor the selection of certain sequences out of a large number of theoretical possible ones. In a first series of experiments we started from a library of Trp-containing dipeptides of the type Trp-X where X is an amino acid residue; and we could show that, when adding this mixture to the POPC liposomes containing a hydrophobic quinoline condensing agent (EEDQ), only the hydrophobic Trp-Trp dipeptide is selected out by the liposomes and transformed into a longer oligomer. Trp-oligomers up to 29 monomers long (water insoluble) could be obtained by using the matrix support of liposomes. Mixed POPC/DDAB liposomes (positive charge) were used to produce co-oligopeptides that contain Trp and Glu residues in the same sequence. Arg/Trp and His/Trp containing sequences were obtained in presence of negatively charged liposomes (mixed POPC/DOPA-liposomes). The polycondensation of racemic NCA-amino acids has been studied to clarify if homochiral sequences are produced preferentially in presence or absence of liposomes. LC-MS and isotope labeling of the L-amino acid, participating in the polymerization reaction achieved this on the level of a direct product analysis. So the individual stereoisomer distribution up to a polymerization degree of 10 (in the case of Trp) could be determined. The data for Trp and other amino acids (Leu, Ile) and amino acid mixtures (Trp/Leu, Trp/Ile, Leu/Ile and Trp/Leu/Ile) show that homochiral sequences are produced preferentially if compared with a random (Bernoulli) distribution.

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Year:  2000        PMID: 11241213     DOI: 10.1002/1097-0282(2000)55:5<381::AID-BIP1012>3.0.CO;2-Q

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  7 in total

1.  Oligomerization of thioglutamic acid: encapsulated reactions and lipid catalysis.

Authors:  H H Zepik; S Rajamani; M-C Maurel; D Deamer
Journal:  Orig Life Evol Biosph       Date:  2007-05-26       Impact factor: 1.950

2.  Protein-mediated selective enclosure of early replicators inside of membranous vesicles: first step towards cell membranes.

Authors:  Tiina Laiterä; Kirsi Lehto
Journal:  Orig Life Evol Biosph       Date:  2009-12       Impact factor: 1.950

3.  The Activation of Free Dipeptides Promoted by Strong Activating Agents in Water Does not Yield Diketopiperazines.

Authors:  Damien Beaufils; Sandra Jepaul; Ziwei Liu; Laurent Boiteau; Robert Pascal
Journal:  Orig Life Evol Biosph       Date:  2015-07-24       Impact factor: 1.950

4.  Viability conditions for a compartmentalized protometabolic system: a semi-empirical approach.

Authors:  Gabriel Piedrafita; Kepa Ruiz-Mirazo; Pierre-Alain Monnard; Athel Cornish-Bowden; Francisco Montero
Journal:  PLoS One       Date:  2012-06-27       Impact factor: 3.240

5.  Characterization of RNA-Like Oligomers from Lipid-Assisted Nonenzymatic Synthesis: Implications for Origin of Informational Molecules on Early Earth.

Authors:  Chaitanya V Mungi; Sudha Rajamani
Journal:  Life (Basel)       Date:  2015-01-05

6.  Molecular complementarity between simple, universal molecules and ions limited phenotype space in the precursors of cells.

Authors:  Vic Norris; Rosetta N Reusch; Kazuei Igarashi; Robert Root-Bernstein
Journal:  Biol Direct       Date:  2014-12-04       Impact factor: 4.540

Review 7.  Small and Random Peptides: An Unexplored Reservoir of Potentially Functional Primitive Organocatalysts. The Case of Seryl-Histidine.

Authors:  Rafal Wieczorek; Katarzyna Adamala; Tecla Gasperi; Fabio Polticelli; Pasquale Stano
Journal:  Life (Basel)       Date:  2017-04-09
  7 in total

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