Literature DB >> 11238994

Mechanism of stimulation of the DNA glycosylase activity of hOGG1 by the major human AP endonuclease: bypass of the AP lyase activity step.

A E Vidal1, I D Hickson, S Boiteux, J P Radicella.   

Abstract

The generation of reactive oxygen species in the cell provokes, among other lesions, the formation of 8-oxo-7,8-dihydroguanine (8-oxoG) in DNA. Due to mispairing with adenine during replication, 8-oxoG is highly mutagenic. To minimise the mutagenic potential of this oxidised purine, human cells have a specific 8-oxoG DNA glycosylase/AP lyase (hOGG1) that initiates the base excision repair (BER) of 8-oxoG. We show here that in vitro this first enzyme of the BER pathway is relatively inefficient because of a high affinity for the product of the reaction it catalyses (half-life of the complex is >2 h), leading to a lack of hOGG1 turnover. However, the glycosylase activity of hOGG1 is stimulated by the major human AP endonuclease, HAP1 (APE1), the enzyme that performs the subsequent step in BER, as well as by a catalytically inactive mutant (HAP1-D210N). In the presence of HAP1, the AP sites generated by the hOGG1 DNA glycosylase can be occupied by the endonuclease, avoiding the re-association of hOGG1. Moreover, the glycosylase has a higher affinity for a non-cleaved AP site than for the cleaved DNA product generated by HAP1. This would shift the equilibrium towards the free glycosylase, making it available to initiate new catalytic cycles. In contrast, HAP1 does not affect the AP lyase activity of hOGG1. This stimulation of only the hOGG1 glycosylase reaction accentuates the uncoupling of its glycosylase and AP lyase activities. These data indicate that, in the presence of HAP1, the BER of 8-oxoG residues can be highly efficient by bypassing the AP lyase activity of hOGG1 and thus excluding a potentially rate limiting step.

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Year:  2001        PMID: 11238994      PMCID: PMC29755          DOI: 10.1093/nar/29.6.1285

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  39 in total

1.  Passing the baton in base excision repair.

Authors:  S H Wilson; T A Kunkel
Journal:  Nat Struct Biol       Date:  2000-03

2.  Crystal structure of a repair enzyme of oxidatively damaged DNA, MutM (Fpg), from an extreme thermophile, Thermus thermophilus HB8.

Authors:  M Sugahara; T Mikawa; T Kumasaka; M Yamamoto; R Kato; K Fukuyama; Y Inoue; S Kuramitsu
Journal:  EMBO J       Date:  2000-08-01       Impact factor: 11.598

3.  Structural basis for recognition and repair of the endogenous mutagen 8-oxoguanine in DNA.

Authors:  S D Bruner; D P Norman; G L Verdine
Journal:  Nature       Date:  2000-02-24       Impact factor: 49.962

4.  Structure of a duplex DNA containing a thymine glycol residue in solution.

Authors:  H C Kung; P H Bolton
Journal:  J Biol Chem       Date:  1997-04-04       Impact factor: 5.157

5.  Substitution of Asp-210 in HAP1 (APE/Ref-1) eliminates endonuclease activity but stabilises substrate binding.

Authors:  D G Rothwell; B Hang; M A Gorman; P S Freemont; B Singer; I D Hickson
Journal:  Nucleic Acids Res       Date:  2000-06-01       Impact factor: 16.971

6.  Effect of single mutations in the OGG1 gene found in human tumors on the substrate specificity of the Ogg1 protein.

Authors:  M Audebert; J P Radicella; M Dizdaroglu
Journal:  Nucleic Acids Res       Date:  2000-07-15       Impact factor: 16.971

7.  Accumulation of premutagenic DNA lesions in mice defective in removal of oxidative base damage.

Authors:  A Klungland; I Rosewell; S Hollenbach; E Larsen; G Daly; B Epe; E Seeberg; T Lindahl; D E Barnes
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-09       Impact factor: 11.205

8.  Catalytic and DNA binding properties of the ogg1 protein of Saccharomyces cerevisiae: comparison between the wild type and the K241R and K241Q active-site mutant proteins.

Authors:  N Guibourt; B Castaing; P A Van Der Kemp; S Boiteux
Journal:  Biochemistry       Date:  2000-02-22       Impact factor: 3.162

9.  Mmh/Ogg1 gene inactivation results in accumulation of 8-hydroxyguanine in mice.

Authors:  O Minowa; T Arai; M Hirano; Y Monden; S Nakai; M Fukuda; M Itoh; H Takano; Y Hippou; H Aburatani; K Masumura; T Nohmi; S Nishimura; T Noda
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-11       Impact factor: 11.205

10.  The lyase activity of the DNA repair protein beta-polymerase protects from DNA-damage-induced cytotoxicity.

Authors:  R W Sobol; R Prasad; A Evenski; A Baker; X P Yang; J K Horton; S H Wilson
Journal:  Nature       Date:  2000-06-15       Impact factor: 49.962

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  92 in total

1.  Telomere proteins POT1, TRF1 and TRF2 augment long-patch base excision repair in vitro.

Authors:  Adam S Miller; Lata Balakrishnan; Noah A Buncher; Patricia L Opresko; Robert A Bambara
Journal:  Cell Cycle       Date:  2012-03-01       Impact factor: 4.534

Review 2.  Clustered DNA lesion repair in eukaryotes: relevance to mutagenesis and cell survival.

Authors:  Evelyne Sage; Lynn Harrison
Journal:  Mutat Res       Date:  2010-12-24       Impact factor: 2.433

Review 3.  Oxidative DNA damage repair in mammalian cells: a new perspective.

Authors:  Tapas K Hazra; Aditi Das; Soumita Das; Sujata Choudhury; Yoke W Kow; Rabindra Roy
Journal:  DNA Repair (Amst)       Date:  2006-11-20

Review 4.  A unified view of base excision repair: lesion-dependent protein complexes regulated by post-translational modification.

Authors:  Karen H Almeida; Robert W Sobol
Journal:  DNA Repair (Amst)       Date:  2007-03-06

5.  ATP-dependent chromatin remodeling is required for base excision repair in conventional but not in variant H2A.Bbd nucleosomes.

Authors:  Hervé Menoni; Didier Gasparutto; Ali Hamiche; Jean Cadet; Stefan Dimitrov; Philippe Bouvet; Dimitar Angelov
Journal:  Mol Cell Biol       Date:  2007-06-25       Impact factor: 4.272

6.  Coordinating the initial steps of base excision repair. Apurinic/apyrimidinic endonuclease 1 actively stimulates thymine DNA glycosylase by disrupting the product complex.

Authors:  Megan E Fitzgerald; Alexander C Drohat
Journal:  J Biol Chem       Date:  2008-09-19       Impact factor: 5.157

7.  Comparative Effects of Ions, Molecular Crowding, and Bulk DNA on the Damage Search Mechanisms of hOGG1 and hUNG.

Authors:  Shannen L Cravens; James T Stivers
Journal:  Biochemistry       Date:  2016-09-07       Impact factor: 3.162

8.  Characterization of DNA glycosylase activity by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

Authors:  Agus Darwanto; Alvin Farrel; Daniel K Rogstad; Lawrence C Sowers
Journal:  Anal Biochem       Date:  2009-07-14       Impact factor: 3.365

9.  Human AP endonuclease 1 stimulates multiple-turnover base excision by alkyladenine DNA glycosylase.

Authors:  Michael R Baldwin; Patrick J O'Brien
Journal:  Biochemistry       Date:  2009-06-30       Impact factor: 3.162

10.  APE1/Ref-1 interacts with NPM1 within nucleoli and plays a role in the rRNA quality control process.

Authors:  Carlo Vascotto; Damiano Fantini; Milena Romanello; Laura Cesaratto; Marta Deganuto; Antonio Leonardi; J Pablo Radicella; Mark R Kelley; Chiara D'Ambrosio; Andrea Scaloni; Franco Quadrifoglio; Gianluca Tell
Journal:  Mol Cell Biol       Date:  2009-02-02       Impact factor: 4.272

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