Literature DB >> 11228431

Sequence and analysis of the Arabidopsis genome.

M Bevan1, K Mayer, O White, J A Eisen, D Preuss, T Bureau, S L Salzberg, H W Mewes.   

Abstract

The comprehensive analysis of the genome sequence of the plant Arabidopsis thaliana has been completed recently. The genome sequence and associated analyses provide the foundations for rapid progress in many fields of plant research, such as the exploitation of genetic variation in Arabidopsis ecotypes, the assessment of the transcriptome and proteome, and the association of genome changes at the sequence level with evolutionary processes. Nevertheless, genome sequencing and analysis are only the first steps towards a new plant biology. Much remains to be done to refine the analysis of encoded genes, to define the functions of encoded proteins systematically, and to establish new generations of databases to capture and relate diverse data sets generated in widely distributed laboratories.

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Year:  2001        PMID: 11228431     DOI: 10.1016/s1369-5266(00)00144-8

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  18 in total

1.  Light control of Arabidopsis development entails coordinated regulation of genome expression and cellular pathways.

Authors:  L Ma; J Li; L Qu; J Hager; Z Chen; H Zhao; X W Deng
Journal:  Plant Cell       Date:  2001-12       Impact factor: 11.277

2.  A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome.

Authors:  Guillaume Blanc; Karsten Hokamp; Kenneth H Wolfe
Journal:  Genome Res       Date:  2003-02       Impact factor: 9.043

Review 3.  The evolutionary demography of duplicate genes.

Authors:  Michael Lynch; John S Conery
Journal:  J Struct Funct Genomics       Date:  2003

4.  A new regulatory role for the chloroplast ATP synthase.

Authors:  Stephen K Herbert
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-23       Impact factor: 11.205

5.  Primary N-assimilation into Amino Acids in Arabidopsis.

Authors:  Gloria M Coruzzi
Journal:  Arabidopsis Book       Date:  2003-09-30

6.  Arabidopsis thaliana: A Model for the Study of Root and Shoot Gravitropism.

Authors:  Patrick H Masson; Masao Tasaka; Miyo T Morita; Changhui Guan; Rujin Chen; Kanokporn Boonsirichai
Journal:  Arabidopsis Book       Date:  2002-03-27

7.  euGenes: a eukaryote genome information system.

Authors:  Donald G Gilbert
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

Review 8.  Comprehensive gene expression analysis by transcript profiling.

Authors:  Jonathan Donson; Yiwen Fang; Gregg Espiritu-Santo; Weimei Xing; Andres Salazar; Susie Miyamoto; Veronica Armendarez; Wayne Volkmuth
Journal:  Plant Mol Biol       Date:  2002-01       Impact factor: 4.076

9.  Comparative analysis of plant and animal models for characterization of Burkholderia cepacia virulence.

Authors:  Steve P Bernier; Laura Silo-Suh; Donald E Woods; Dennis E Ohman; Pamela A Sokol
Journal:  Infect Immun       Date:  2003-09       Impact factor: 3.441

10.  Computational identification and characterization of novel genes from legumes.

Authors:  Michelle A Graham; Kevin A T Silverstein; Steven B Cannon; Kathryn A VandenBosch
Journal:  Plant Physiol       Date:  2004-07       Impact factor: 8.340

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