Literature DB >> 11217903

Testing demographic models of effective population size.

P Basset1, F Balloux, N Perrin.   

Abstract

Due to practical difficulties in obtaining direct genetic estimates of effective sizes, conservation biologists have to rely on so-called 'demographic models' which combine life-history and mating-system parameters with F-statistics in order to produce indirect estimates of effective sizes. However, for the same practical reasons that prevent direct genetic estimates, the accuracy of demographic models is difficult to evaluate. Here we use individual-based, genetically explicit computer simulations in order to investigate the accuracy of two such demographic models aimed at investigating the hierarchical structure of populations. We show that, by and large, these models provide good estimates under a wide range of mating systems and dispersal patterns. However, one of the models should be avoided whenever the focal species' breeding system approaches monogamy with no sex bias in dispersal or when a substructure within social groups is suspected because effective sizes may then be strongly overestimated. The timing during the life cycle at which F-statistics are evaluated is also of crucial importance and attention should be paid to it when designing field sampling since different demographic models assume different timings. Our study shows that individual-based, genetically explicit models provide a promising way of evaluating the accuracy of demographic models of effective size and delineate their field of applicability.

Mesh:

Year:  2001        PMID: 11217903      PMCID: PMC1088608          DOI: 10.1098/rspb.2000.1359

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  10 in total

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Journal:  Genetics       Date:  1931-03       Impact factor: 4.562

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Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

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Journal:  Genetics       Date:  1989-02       Impact factor: 4.562

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Journal:  Proc Natl Acad Sci U S A       Date:  1973-12       Impact factor: 11.205

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Journal:  Theor Popul Biol       Date:  1972-09       Impact factor: 1.570

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Authors:  R K Chesser; O E Rhodes; D W Sugg; A Schnabel
Journal:  Genetics       Date:  1993-12       Impact factor: 4.562

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Journal:  Ann Hum Genet       Date:  1983-07       Impact factor: 1.670

10.  Temporal genetic variation of mitochondrial DNA and the female effective population size of red drum (Sciaenops ocellatus) in the northern Gulf of Mexico.

Authors: 
Journal:  Mol Ecol       Date:  1999-07       Impact factor: 6.185

  10 in total
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Journal:  Genetics       Date:  2002-05       Impact factor: 4.562

2.  Random mating with a finite number of matings.

Authors:  François Balloux; Laurent Lehmann
Journal:  Genetics       Date:  2003-12       Impact factor: 4.562

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Authors:  Aline Magdalena Lee; Steinar Engen; Bernt-Erik Sæther
Journal:  Proc Biol Sci       Date:  2011-03-24       Impact factor: 5.349

4.  On some genetic consequences of social structure, mating systems, dispersal, and sampling.

Authors:  Bárbara R Parreira; Lounès Chikhi
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-16       Impact factor: 11.205

5.  Genetic signatures of population bottlenecks, relatedness, and inbreeding highlight recent and novel conservation concerns in the Egyptian vulture.

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Journal:  PeerJ       Date:  2021-03-25       Impact factor: 2.984

  5 in total

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