Literature DB >> 11205336

Transcription, beta-like DNA polymerases and hypermutation.

C A Reynaud1, S Frey, S Aoufouchi, A Faili, B Bertocci, A Dahan, E Flatter, F Delbos, S Storck, C Zober, J C Weill.   

Abstract

This paper discusses two aspects of immunoglobulin (Ig) gene hypermutation. In the first approach, a transcription termination signal is introduced in an Ig light chain transgene acting as a mutation substrate, and transgenic lines are generated with control and mutant transgenes integrated in tandem. Analysis of transcription levels and mutation frequencies between mutant and control transgenes clearly dissociates transcription elongation and mutation, and therefore argues against models whereby specific pausing of the RNA polymerase during V gene transcription would trigger an error-prone repair process. The second part reports the identification of two novel beta-like DNA polymerases named Pol lambda and Pol mu, one of which (Pol mu) represents a good candidate for the Ig mutase due to its higher lymphoid expression and its similarity with the lymphoid enzyme terminal deoxynucleotidyl transferase. Peculiar features of the expression of this gene, including an unusual splicing variability and a splicing inhibition in response to DNA-damaging agents, are discussed.

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Year:  2001        PMID: 11205336      PMCID: PMC1087696          DOI: 10.1098/rstb.2000.0753

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  38 in total

1.  Mice reconstituted with DNA polymerase beta-deficient fetal liver cells are able to mount a T cell-dependent immune response and mutate their Ig genes normally.

Authors:  G Esposito; G Texido; U A Betz; H Gu; W Müller; U Klein; K Rajewsky
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-01       Impact factor: 11.205

2.  The helix-hairpin-helix DNA-binding motif: a structural basis for non-sequence-specific recognition of DNA.

Authors:  A J Doherty; L C Serpell; C P Ponting
Journal:  Nucleic Acids Res       Date:  1996-07-01       Impact factor: 16.971

3.  Somatic hypermutation of Ig genes in patients with xeroderma pigmentosum (XP-D).

Authors:  S D Wagner; J G Elvin; P Norris; J M McGregor; M S Neuberger
Journal:  Int Immunol       Date:  1996-05       Impact factor: 4.823

4.  Cells strongly expressing Ig(kappa) transgenes show clonal recruitment of hypermutation: a role for both MAR and the enhancers.

Authors:  B Goyenechea; N Klix; J Yélamos; G T Williams; A Riddell; M S Neuberger; C Milstein
Journal:  EMBO J       Date:  1997-07-01       Impact factor: 11.598

5.  Induction of somatic mutation in a human B cell line in vitro.

Authors:  S Denépoux; D Razanajaona; D Blanchard; G Meffre; J D Capra; J Banchereau; S Lebecque
Journal:  Immunity       Date:  1997-01       Impact factor: 31.745

6.  A superfamily of conserved domains in DNA damage-responsive cell cycle checkpoint proteins.

Authors:  P Bork; K Hofmann; P Bucher; A F Neuwald; S F Altschul; E V Koonin
Journal:  FASEB J       Date:  1997-01       Impact factor: 5.191

Review 7.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

8.  DNA polymerase beta belongs to an ancient nucleotidyltransferase superfamily.

Authors:  L Holm; C Sander
Journal:  Trends Biochem Sci       Date:  1995-09       Impact factor: 13.807

9.  The inactivation of the XP-C gene does not affect somatic hypermutation or class switch recombination of immunoglobulin genes.

Authors:  H M Shen; D L Cheo; E Friedberg; U Storb
Journal:  Mol Immunol       Date:  1997-05       Impact factor: 4.407

10.  B lymphocytes of xeroderma pigmentosum or Cockayne syndrome patients with inherited defects in nucleotide excision repair are fully capable of somatic hypermutation of immunoglobulin genes.

Authors:  N Kim; K Kage; F Matsuda; M P Lefranc; U Storb
Journal:  J Exp Med       Date:  1997-08-04       Impact factor: 14.307

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  7 in total

1.  The intrinsic hypermutability of antibody heavy and light chain genes decays exponentially.

Authors:  C Rada; C Milstein
Journal:  EMBO J       Date:  2001-08-15       Impact factor: 11.598

Review 2.  Terminal deoxynucleotidyl transferase: the story of a misguided DNA polymerase.

Authors:  Edward A Motea; Anthony J Berdis
Journal:  Biochim Biophys Acta       Date:  2009-07-29

3.  Terminal deoxynucleotidyl transferases from elasmobranchs reveal structural conservation within vertebrates.

Authors:  Simona Bartl; Ann L Miracle; Lynn L Rumfelt; Thomas B Kepler; Evonne Mochon; Gary W Litman; Martin F Flajnik
Journal:  Immunogenetics       Date:  2003-10-25       Impact factor: 2.846

4.  Association of DNA polymerase mu (pol mu) with Ku and ligase IV: role for pol mu in end-joining double-strand break repair.

Authors:  Kiran N Mahajan; Stephanie A Nick McElhinny; Beverly S Mitchell; Dale A Ramsden
Journal:  Mol Cell Biol       Date:  2002-07       Impact factor: 4.272

Review 5.  Immunoglobulin somatic hypermutation: double-strand DNA breaks, AID and error-prone DNA repair.

Authors:  Xiaoping Wu; Junli Feng; Atsumasa Komori; Edmund C Kim; Hong Zan; Paolo Casali
Journal:  J Clin Immunol       Date:  2003-07       Impact factor: 8.317

6.  DNA double-strand breaks: prior to but not sufficient in targeting hypermutation.

Authors:  Linda Bross; Masamichi Muramatsu; Kazuo Kinoshita; Tasuku Honjo; Heinz Jacobs
Journal:  J Exp Med       Date:  2002-05-06       Impact factor: 14.307

7.  Modulation of Pleurodeles waltl DNA polymerase mu expression by extreme conditions encountered during spaceflight.

Authors:  Véronique Schenten; Nathan Guéguinou; Sarah Baatout; Jean-Pol Frippiat
Journal:  PLoS One       Date:  2013-07-31       Impact factor: 3.240

  7 in total

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