Literature DB >> 11204769

Application of a method incorporating differential centrifugation for selective isolation of motile actinomycetes in soil and plant litter.

M Hayakawa1, M Otoguro, T Takeuchi, T Yamazaki, Y Iimura.   

Abstract

The present paper describes a simple enrichment technique which enables rapid and selective isolation of diverse zoosporic actinomycete genera directly from soil and plant litter. This technique, designated the rehydration and centrifugation (RC) method, consists of immersing the air-dried source material in 10 mM phosphate buffer containing 10% soil extract, letting the preparation stand at 30 degrees C for 90 min, followed by centrifugation of the fluid at 1,500 x g for 20 min. Portions of the supernatant containing actinomycete zoospores are plated on the humic acid-vitamin agar which is supplemented with nalidixic acid and trimethoprim as the selective inhibitors for Gram-negative bacteria and bacilli. The phosphate buffer-soil extract solution significantly promoted liberation of motile zoospores from the source material. The centrifugation stage greatly eliminated streptomycetes and other non-motile actinomycetes from the liquid phase, thereby facilitating selective growth of rare, motile actinomycetes on the isolation plates subsequent to inoculation. Ten different soil and leaf-litter samples, taken from fields, forests, and stream banks, were examined. The RC method consistently achieved preferential isolation of motile actinomycetes in all samples, which accounted for 37-86% of the total microbial population recovered. The most frequently isolated motile actinomycetes were Actinoplanes and Dactylosporangium. Strains of Actinokineospora, Catenuloplanes and Kineosporia were also recovered, depending on the nature of the samples examined. Other motile actinomycetes that were occasionally isolated in small numbers included Actinosynnema, Geodermatophilus and Sporichthya.

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Year:  2000        PMID: 11204769     DOI: 10.1023/a:1026579426265

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  14 in total

1.  Characterization of Nocardia asteroides isolates from different ecological habitats on the basis of repetitive extragenic palindromic-PCR fingerprinting.

Authors:  Hideki Yamamura; Masayuki Hayakawa; Youji Nakagawa; Yuzuru Iimura
Journal:  Appl Environ Microbiol       Date:  2004-05       Impact factor: 4.792

2.  Biosynthetic potential of phylogenetically unique endophytic actinomycetes from tropical plants.

Authors:  Jeffrey E Janso; Guy T Carter
Journal:  Appl Environ Microbiol       Date:  2010-05-14       Impact factor: 4.792

Review 3.  Current approaches to exploit actinomycetes as a source of novel natural products.

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Journal:  J Ind Microbiol Biotechnol       Date:  2010-10-08       Impact factor: 3.346

4.  Isolation, diversity, and antimicrobial activity of rare actinobacteria from medicinal plants of tropical rain forests in Xishuangbanna, China.

Authors:  Sheng Qin; Jie Li; Hua-Hong Chen; Guo-Zhen Zhao; Wen-Yong Zhu; Cheng-Lin Jiang; Li-Hua Xu; Wen-Jun Li
Journal:  Appl Environ Microbiol       Date:  2009-07-31       Impact factor: 4.792

5.  Red soils harbor diverse culturable actinomycetes that are promising sources of novel secondary metabolites.

Authors:  Xiaoxuan Guo; Ning Liu; Xiaomin Li; Yun Ding; Fei Shang; Yongsheng Gao; Jisheng Ruan; Ying Huang
Journal:  Appl Environ Microbiol       Date:  2015-02-27       Impact factor: 4.792

6.  Virgisporangium myanmarense sp. nov., a novel motile actinomycete isolated from an anthill soil in Myanmar.

Authors:  Hideki Yamamura; Shoya Miyazaki; Kodai Ikoma; Youji Nakagawa; Moriyuki Hamada; Misa Otoguro; Tomohiko Tamura; Katsuhiko Ando; Nyunt Phay; Masayuki Hayakawa
Journal:  J Antibiot (Tokyo)       Date:  2017-07-12       Impact factor: 2.649

7.  Wenyingzhuangia aestuarii sp. nov., A Marine Bacterium of the Family Flavobacteriaceae Isolated from an Estuary.

Authors:  Jaewoo Yoon; Hiroaki Kasai
Journal:  Curr Microbiol       Date:  2015-12-21       Impact factor: 2.188

8.  Harnessing Rare Actinomycete Interactions and Intrinsic Antimicrobial Resistance Enables Discovery of an Unusual Metabolic Inhibitor.

Authors:  Dylan J McClung; Yongle Du; Dominic J Antonich; Bailey Bonet; Wenjun Zhang; Matthew F Traxler
Journal:  mBio       Date:  2022-05-24       Impact factor: 7.786

9.  Actinoplanes bogoriensis sp. nov., a novel actinomycete isolated from leaf litter.

Authors:  Arif Nurkanto; Puspita Lisdiyanti; Moriyuki Hamada; Shanti Ratnakomala; Chiyo Shibata; Tomohiko Tamura
Journal:  J Antibiot (Tokyo)       Date:  2015-08-05       Impact factor: 2.649

10.  Actinomycetal community structures in seawater and freshwater examined by DGGE analysis of 16S rRNA gene fragments.

Authors:  Akihiro Yoshida; Yuna Seo; Shuhei Suzuki; Tomohiko Nishino; Takeshi Kobayashi; Naoko Hamada-Sato; Kazuhiro Kogure; Chiaki Imada
Journal:  Mar Biotechnol (NY)       Date:  2008-04-17       Impact factor: 3.727

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