Literature DB >> 11201750

Processive translocation and DNA unwinding by individual RecBCD enzyme molecules.

P R Bianco1, L R Brewer, M Corzett, R Balhorn, Y Yeh, S C Kowalczykowski, R J Baskin.   

Abstract

RecBCD enzyme is a processive DNA helicase and nuclease that participates in the repair of chromosomal DNA through homologous recombination. We have visualized directly the movement of individual RecBCD enzymes on single molecules of double-stranded DNA (dsDNA). Detection involves the optical trapping of solitary, fluorescently tagged dsDNA molecules that are attached to polystyrene beads, and their visualization by fluorescence microscopy. Both helicase translocation and DNA unwinding are monitored by the displacement of fluorescent dye from the DNA by the enzyme. Here we show that unwinding is both continuous and processive, occurring at a maximum rate of 972 +/- 172 base pairs per second (0.30 microm s(-1)), with as many as 42,300 base pairs of dsDNA unwound by a single RecBCD enzyme molecule. The mean behaviour of the individual RecBCD enzyme molecules corresponds to that observed in bulk solution.

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Year:  2001        PMID: 11201750     DOI: 10.1038/35053131

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  134 in total

Review 1.  DNA replication meets genetic exchange: chromosomal damage and its repair by homologous recombination.

Authors:  A Kuzminov
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

Review 2.  Single-molecule views of protein movement on single-stranded DNA.

Authors:  Taekjip Ha; Alexander G Kozlov; Timothy M Lohman
Journal:  Annu Rev Biophys       Date:  2012-02-23       Impact factor: 12.981

3.  Probing protein-DNA interactions by unzipping a single DNA double helix.

Authors:  Steven J Koch; Alla Shundrovsky; Benjamin C Jantzen; Michelle D Wang
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

4.  Dynamics of molecular motors and polymer translocation with sequence heterogeneity.

Authors:  Yariv Kafri; David K Lubensky; David R Nelson
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

5.  RuvAB-directed branch migration of individual Holliday junctions is impeded by sequence heterology.

Authors:  Cynthia Dennis; Andrei Fedorov; Emmanuel Käs; Laurence Salomé; Mikhail Grigoriev
Journal:  EMBO J       Date:  2004-05-27       Impact factor: 11.598

6.  Direct observation of RuvAB-catalyzed branch migration of single Holliday junctions.

Authors:  Roee Amit; Opher Gileadi; Joel Stavans
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-03       Impact factor: 11.205

7.  Single-molecule assay reveals strand switching and enhanced processivity of UvrD.

Authors:  Marie-Noëlle Dessinges; Timothée Lionnet; Xu Guang Xi; David Bensimon; Vincent Croquette
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-12       Impact factor: 11.205

8.  Forward and reverse motion of single RecBCD molecules on DNA.

Authors:  Thomas T Perkins; Hung-Wen Li; Ravindra V Dalal; Jeff Gelles; Steven M Block
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

Review 9.  How RecBCD enzyme and Chi promote DNA break repair and recombination: a molecular biologist's view.

Authors:  Gerald R Smith
Journal:  Microbiol Mol Biol Rev       Date:  2012-06       Impact factor: 11.056

Review 10.  Helicases as antiviral drug targets.

Authors:  David N Frick
Journal:  Drug News Perspect       Date:  2003 Jul-Aug
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