Literature DB >> 11197620

Mitochondrial DNA sequences for 118 individuals from northeastern Spain.

M Crespillo1, J A Luque, M Paredes, R Fernández, E Ramírez, J L Valverde.   

Abstract

A population database was generated from 118 unrelated Caucasoid individuals living in Spain. Sequence polymorphisms of the mitochondrial DNA (mtDNA) control region, hypervariable regions I and II (HVRI and HVRII) were determined using the polymerase chain reaction (PCR) and direct sequencing. A total of 102 different sequences were found as defined by 105 variable positions. The most common sequence occurred six times, and this sequence is also the most frequent in other European populations such as Austria, Germany and Britain. The mean pair-wise difference for the two HVR regions taken together was 7.74. The study revealed that transitions made up the majority of the variations (88%), whereas we observed a significantly lower frequency of transversions (8%). Also one individual in this study was observed with two positions of heteroplasmy at nucleotides 150 (C/T) and 153 (G/A). A statistical estimate of the results for this population showed a genetic diversity of 0.99. The probability of two random individuals showing identical mtDNA haplotypes is 1.3%. In order to use the mtDNA analysis in forensic casework, we consider that it is of crucial importance to know the frequency of the different sequences of mtDNA, and this data base study could be a useful tool to statistically evaluate the results.

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Year:  2000        PMID: 11197620     DOI: 10.1007/s004140000158

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  18 in total

1.  Control region mtDNA variants: longevity, climatic adaptation, and a forensic conundrum.

Authors:  Pinar E Coskun; Eduardo Ruiz-Pesini; Douglas C Wallace
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-26       Impact factor: 11.205

2.  Mitochondrial DNA D-loop hypervariable regions: Czech population data.

Authors:  T Vanecek; F Vorel; M Sip
Journal:  Int J Legal Med       Date:  2003-10-31       Impact factor: 2.686

3.  Sequence polymorphism of the mitochondrial DNA control region in the Slovenian population.

Authors:  I Zupanic Pajnic; J Balazic; R Komel
Journal:  Int J Legal Med       Date:  2003-10-08       Impact factor: 2.686

4.  Artificial recombination in forensic mtDNA population databases.

Authors:  H J Bandelt; A Salas; S Lutz-Bonengel
Journal:  Int J Legal Med       Date:  2004-10       Impact factor: 2.686

5.  The western and eastern roots of the Saami--the story of genetic "outliers" told by mitochondrial DNA and Y chromosomes.

Authors:  Kristiina Tambets; Siiri Rootsi; Toomas Kivisild; Hela Help; Piia Serk; Eva-Liis Loogväli; Helle-Viivi Tolk; Maere Reidla; Ene Metspalu; Liana Pliss; Oleg Balanovsky; Andrey Pshenichnov; Elena Balanovska; Marina Gubina; Sergey Zhadanov; Ludmila Osipova; Larisa Damba; Mikhail Voevoda; Ildus Kutuev; Marina Bermisheva; Elza Khusnutdinova; Vladislava Gusar; Elena Grechanina; Jüri Parik; Erwan Pennarun; Christelle Richard; Andre Chaventre; Jean-Paul Moisan; Lovorka Barác; Marijana Pericić; Pavao Rudan; Rifat Terzić; Ilia Mikerezi; Astrida Krumina; Viesturs Baumanis; Slawomir Koziel; Olga Rickards; Gian Franco De Stefano; Nicholas Anagnou; Kalliopi I Pappa; Emmanuel Michalodimitrakis; Vladimir Ferák; Sandor Füredi; Radovan Komel; Lars Beckman; Richard Villems
Journal:  Am J Hum Genet       Date:  2004-03-11       Impact factor: 11.025

6.  Mitochondrial DNA sequence variation in Jewish populations.

Authors:  A Picornell; P Giménez; J A Castro; M M Ramon
Journal:  Int J Legal Med       Date:  2006-05-18       Impact factor: 2.686

7.  Mitochondrial DNA variation of modern Tuscans supports the near eastern origin of Etruscans.

Authors:  Alessandro Achilli; Anna Olivieri; Maria Pala; Ene Metspalu; Simona Fornarino; Vincenza Battaglia; Matteo Accetturo; Ildus Kutuev; Elsa Khusnutdinova; Erwan Pennarun; Nicoletta Cerutti; Cornelia Di Gaetano; Francesca Crobu; Domenico Palli; Giuseppe Matullo; A Silvana Santachiara-Benerecetti; L Luca Cavalli-Sforza; Ornella Semino; Richard Villems; Hans-Jurgen Bandelt; Alberto Piazza; Antonio Torroni
Journal:  Am J Hum Genet       Date:  2007-02-06       Impact factor: 11.025

8.  Italian mitochondrial DNA database: results of a collaborative exercise and proficiency testing.

Authors:  Chiara Turchi; Loredana Buscemi; Carlo Previderè; Pierangela Grignani; Anita Brandstätter; Alessandro Achilli; Walther Parson; Adriano Tagliabracci
Journal:  Int J Legal Med       Date:  2007-10-20       Impact factor: 2.686

9.  Personal identification of cold case remains through combined contribution from anthropological, mtDNA, and bomb-pulse dating analyses.

Authors:  Camilla F Speller; Kirsty L Spalding; Bruce A Buchholz; Dean Hildebrand; Jason Moore; Rolf Mathewes; Mark F Skinner; Dongya Y Yang
Journal:  J Forensic Sci       Date:  2012-07-16       Impact factor: 1.832

10.  Origin and diffusion of mtDNA haplogroup X.

Authors:  Maere Reidla; Toomas Kivisild; Ene Metspalu; Katrin Kaldma; Kristiina Tambets; Helle-Viivi Tolk; Jüri Parik; Eva-Liis Loogväli; Miroslava Derenko; Boris Malyarchuk; Marina Bermisheva; Sergey Zhadanov; Erwan Pennarun; Marina Gubina; Maria Golubenko; Larisa Damba; Sardana Fedorova; Vladislava Gusar; Elena Grechanina; Ilia Mikerezi; Jean-Paul Moisan; André Chaventré; Elsa Khusnutdinova; Ludmila Osipova; Vadim Stepanov; Mikhail Voevoda; Alessandro Achilli; Chiara Rengo; Olga Rickards; Gian Franco De Stefano; Surinder Papiha; Lars Beckman; Branka Janicijevic; Pavao Rudan; Nicholas Anagnou; Emmanuel Michalodimitrakis; Slawomir Koziel; Esien Usanga; Tarekegn Geberhiwot; Corinna Herrnstadt; Neil Howell; Antonio Torroni; Richard Villems
Journal:  Am J Hum Genet       Date:  2003-10-20       Impact factor: 11.025

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