Literature DB >> 11196881

Similarities and differences between cobalamins and cobaloximes. Accurate structural determination of methylcobalamin and of LiCl- and KCl-containing cyanocobalamins by synchrotron radiation.

L Randaccio1, M Furlan, S Geremia, M Slouf, I Srnova, D Toffoli.   

Abstract

The accurate crystal structure determinations of MeCbl (1), CNCbl.2LiCl (2), and CNCbl.KCl (3), based on synchrotron diffraction data collected at 100 K and using high-quality single crystals, are reported. Refinements gave R1 indices of 0.0834 (1), 0.0434 (2), and 0.0773 (3). The influence of the water of crystallization and ion content on the crystal packing of these and other cobalamins (XCbl) is discussed, and a relationship between the crystal packing and the corrin side chain conformations is presented. An analysis of the bond lengths within the corrin moiety, based on 13 accurate structures with several X groups, shows that the trend of the C-C and C-N distances can be interpreted in terms of electronic and steric factors. The variation in structural, NMR and IR spectroscopic, and electrochemical properties are compared with those of cobaloximes, the B12 model, when X is varied. This comparison indicates that the pi-back-donation from metal to the CN axial ligand and the transmission of the trans influence of the X ligand are more effective in cobalamins than in cobaloximes. These findings are consistent with a significantly greater availability of electron charge on Co in cobalamins, and, hence, a semiquantitative evaluation of the electronic difference between the cobalt centers in the two systems is allowed.

Entities:  

Year:  2000        PMID: 11196881     DOI: 10.1021/ic0001199

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  12 in total

1.  Redetermination of the X-ray structure of nitroxylcobalamin: base-on nitroxylcobalamin exhibits a remarkably long Co-N(dimethylbenzimidazole) bond distance.

Authors:  Hanaa A Hassanin; Mohamed F El-Shahat; Serena DeBeer; Clyde A Smith; Nicola E Brasch
Journal:  Dalton Trans       Date:  2010-10-04       Impact factor: 4.390

2.  Computational study on the difference between the Co-C bond dissociation energy in methylcobalamin and adenosylcobalamin.

Authors:  Nicole Dölker; Antonio Morreale; Feliu Maseras
Journal:  J Biol Inorg Chem       Date:  2005-09-23       Impact factor: 3.358

3.  DFT analysis of co-alkyl and co-adenosyl vibrational modes in B12-cofactors.

Authors:  Pawel M Kozlowski; Tadeusz Andruniow; Andrzej A Jarzecki; Marek Z Zgierski; Thomas G Spiro
Journal:  Inorg Chem       Date:  2006-07-10       Impact factor: 5.165

4.  The X-ray crystal structure of glutathionylcobalamin revealed.

Authors:  Luciana Hannibal; Clyde A Smith; Donald W Jacobsen
Journal:  Inorg Chem       Date:  2010-11-01       Impact factor: 5.165

5.  Combined spectroscopic/computational studies of vitamin B12 precursors: geometric and electronic structures of cobinamides.

Authors:  Amanda J Reig; Karen S Conrad; Thomas C Brunold
Journal:  Inorg Chem       Date:  2012-02-14       Impact factor: 5.165

6.  Spectroscopic studies of the corrinoid/iron-sulfur protein from Moorella thermoacetica.

Authors:  Troy A Stich; Javier Seravalli; Swarnalatha Venkateshrao; Thomas G Spiro; Stephen W Ragsdale; Thomas C Brunold
Journal:  J Am Chem Soc       Date:  2006-04-19       Impact factor: 15.419

Review 7.  Cobalamin-dependent and cobamide-dependent methyltransferases.

Authors:  Rowena G Matthews; Markos Koutmos; Supratim Datta
Journal:  Curr Opin Struct Biol       Date:  2008-12       Impact factor: 6.809

8.  NMR spectroscopy and molecular modelling studies of nitrosylcobalamin: further evidence that the deprotonated, base-off form is important for nitrosylcobalamin in solution.

Authors:  Hanaa A Hassanin; Luciana Hannibal; Donald W Jacobsen; Kenneth L Brown; Helder M Marques; Nicola E Brasch
Journal:  Dalton Trans       Date:  2008-12-05       Impact factor: 4.390

9.  Vitamin B(12) and alpha-Ribonucleosides.

Authors:  Tilak Chandra; Kenneth L Brown
Journal:  Tetrahedron       Date:  2008-01-01       Impact factor: 2.457

10.  High resolution crystal structure of the methylcobalamin analogues ethylcobalamin and butylcobalamin by X-ray synchrotron diffraction.

Authors:  Luciana Hannibal; Clyde A Smith; Jessica A Smith; Armend Axhemi; Abby Miller; Sihe Wang; Nicola E Brasch; Donald W Jacobsen
Journal:  Inorg Chem       Date:  2009-07-20       Impact factor: 5.165

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