Literature DB >> 11195936

Kernel and nonlinear canonical correlation analysis.

P L Lai1, C Fyfe.   

Abstract

We review a neural implementation of the statistical technique of Canonical Correlation Analysis (CCA) and extend it to nonlinear CCA. We then derive the method of kernel-based CCA and compare these two methods on real and artificial data sets before using both on the Blind Separation of Sources.

Mesh:

Year:  2000        PMID: 11195936     DOI: 10.1142/S012906570000034X

Source DB:  PubMed          Journal:  Int J Neural Syst        ISSN: 0129-0657            Impact factor:   5.866


  12 in total

1.  LOCAL KERNEL CANONICAL CORRELATION ANALYSIS WITH APPLICATION TO VIRTUAL DRUG SCREENING.

Authors:  Daniel Samarov; J S Marron; Yufeng Liu; Christopher Grulke; Alexander Tropsha
Journal:  Ann Appl Stat       Date:  2011-09-01       Impact factor: 2.083

2.  A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines.

Authors:  Mehmet Gönen; Barbara A Weir; Glenn S Cowley; Francisca Vazquez; Yuanfang Guan; Alok Jaiswal; Masayuki Karasuyama; Vladislav Uzunangelov; Tao Wang; Aviad Tsherniak; Sara Howell; Daniel Marbach; Bruce Hoff; Thea C Norman; Antti Airola; Adrian Bivol; Kerstin Bunte; Daniel Carlin; Sahil Chopra; Alden Deran; Kyle Ellrott; Peddinti Gopalacharyulu; Kiley Graim; Samuel Kaski; Suleiman A Khan; Yulia Newton; Sam Ng; Tapio Pahikkala; Evan Paull; Artem Sokolov; Hao Tang; Jing Tang; Krister Wennerberg; Yang Xie; Xiaowei Zhan; Fan Zhu; Tero Aittokallio; Hiroshi Mamitsuka; Joshua M Stuart; Jesse S Boehm; David E Root; Guanghua Xiao; Gustavo Stolovitzky; William C Hahn; Adam A Margolin
Journal:  Cell Syst       Date:  2017-10-04       Impact factor: 10.304

Review 3.  Multi-omic and multi-view clustering algorithms: review and cancer benchmark.

Authors:  Nimrod Rappoport; Ron Shamir
Journal:  Nucleic Acids Res       Date:  2018-11-16       Impact factor: 16.971

4.  Joint sparse canonical correlation analysis for detecting differential imaging genetics modules.

Authors:  Jian Fang; Dongdong Lin; S Charles Schulz; Zongben Xu; Vince D Calhoun; Yu-Ping Wang
Journal:  Bioinformatics       Date:  2016-07-27       Impact factor: 6.937

5.  Canonical correlation analysis for gene-based pleiotropy discovery.

Authors:  Jose A Seoane; Colin Campbell; Ian N M Day; Juan P Casas; Tom R Gaunt
Journal:  PLoS Comput Biol       Date:  2014-10-16       Impact factor: 4.475

6.  Kernel Manifold Alignment for Domain Adaptation.

Authors:  Devis Tuia; Gustau Camps-Valls
Journal:  PLoS One       Date:  2016-02-12       Impact factor: 3.240

7.  Deep learning-based cross-classifications reveal conserved spatial behaviors within tumor histological images.

Authors:  Javad Noorbakhsh; Saman Farahmand; Ali Foroughi Pour; Sandeep Namburi; Dennis Caruana; David Rimm; Mohammad Soltanieh-Ha; Kourosh Zarringhalam; Jeffrey H Chuang
Journal:  Nat Commun       Date:  2020-12-11       Impact factor: 14.919

8.  Nonlinear Canonical Correlation Analysis:A Compressed Representation Approach.

Authors:  Amichai Painsky; Meir Feder; Naftali Tishby
Journal:  Entropy (Basel)       Date:  2020-02-12       Impact factor: 2.524

Review 9.  Microbiome Multi-Omics Network Analysis: Statistical Considerations, Limitations, and Opportunities.

Authors:  Duo Jiang; Courtney R Armour; Chenxiao Hu; Meng Mei; Chuan Tian; Thomas J Sharpton; Yuan Jiang
Journal:  Front Genet       Date:  2019-11-08       Impact factor: 4.599

10.  Kernel methods and their derivatives: Concept and perspectives for the earth system sciences.

Authors:  J Emmanuel Johnson; Valero Laparra; Adrián Pérez-Suay; Miguel D Mahecha; Gustau Camps-Valls
Journal:  PLoS One       Date:  2020-10-29       Impact factor: 3.240

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