Literature DB >> 11181026

Organization of human cardiovascular-expressed genes on chromosomes 21 and 22.

A A Dempsey1, N Pabalan, H C Tang, C C Liew.   

Abstract

The recent availability of the sequenced and annotated DNA sequences of chromosomes 21 and 22 has initiated the next phase in the human genome project: the application of this resource. One facet of these data is that they provide a list of ordered genes along the chromosome that can be capitalized upon to determine gene position effects. Specifically, the physical position and distribution of genes along the chromosomes may be related to gene expression in specific organs or organ systems. In this report we index the subset of genes constituting the human "cardiovascular genome" on chromosomes 21q and 22q as well as report the identification of several "cardiovascular gene" clusters. These gene clusters are suggestive of a higher order of tissue-specific gene regulation at the chromosomal level. Copyright 2001 Academic Press.

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Year:  2001        PMID: 11181026     DOI: 10.1006/jmcc.2000.1335

Source DB:  PubMed          Journal:  J Mol Cell Cardiol        ISSN: 0022-2828            Impact factor:   5.000


  6 in total

Review 1.  In silico identification of metazoan transcriptional regulatory regions.

Authors:  Wyeth W Wasserman; William Krivan
Journal:  Naturwissenschaften       Date:  2003-03-27

2.  Positional clustering of differentially expressed genes on human chromosomes 20, 21 and 22.

Authors:  Karine Mégy; Stéphane Audic; Jean-Michel Claverie
Journal:  Genome Biol       Date:  2003-01-10       Impact factor: 13.583

3.  Chromosomal clustering of a human transcriptome reveals regulatory background.

Authors:  Jan H Vogel; Anja von Heydebreck; Antje Purmann; Silke Sperling
Journal:  BMC Bioinformatics       Date:  2005-09-19       Impact factor: 3.169

4.  A method for similarity search of genomic positional expression using CAGE.

Authors:  Shigeto Seno; Yoichi Takenaka; Chikatoshi Kai; Jun Kawai; Piero Carninci; Yoshihide Hayashizaki; Hideo Matsuda
Journal:  PLoS Genet       Date:  2006-04-28       Impact factor: 5.917

5.  Genome-scale analysis of positional clustering of mouse testis-specific genes.

Authors:  Quan Li; Bernett T K Lee; Louxin Zhang
Journal:  BMC Genomics       Date:  2005-01-19       Impact factor: 3.969

6.  Positive correlation between gene coexpression and positional clustering in the zebrafish genome.

Authors:  Yen Kaow Ng; Wei Wu; Louxin Zhang
Journal:  BMC Genomics       Date:  2009-01-22       Impact factor: 3.969

  6 in total

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