Literature DB >> 11179892

Recent advances in RNA-protein recognition.

J M Pérez-Cañadillas1, G Varani.   

Abstract

The past few years have witnessed remarkable progress in knowledge of the structure and function of RNA-binding proteins and their RNA complexes. X-ray crystallography and NMR spectroscopy have provided structures for all major classes of RNA-binding proteins, both alone and complexed with RNA. New computational and experimental tools have provided unprecedented insight into the molecular basis of RNA recognition.

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Year:  2001        PMID: 11179892     DOI: 10.1016/s0959-440x(00)00164-0

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  51 in total

1.  Non-coding RNAs: the architects of eukaryotic complexity.

Authors:  J S Mattick
Journal:  EMBO Rep       Date:  2001-11       Impact factor: 8.807

2.  Investigation of a conserved stacking interaction in target site recognition by the U1A protein.

Authors:  Jerome C Shiels; Jacob B Tuite; Scott J Nolan; Anne M Baranger
Journal:  Nucleic Acids Res       Date:  2002-01-15       Impact factor: 16.971

3.  Solution structure of the LicT-RNA antitermination complex: CAT clamping RAT.

Authors:  Yinshan Yang; Nathalie Declerck; Xavier Manival; Stéphane Aymerich; Michel Kochoyan
Journal:  EMBO J       Date:  2002-04-15       Impact factor: 11.598

4.  Crystal structure of the Drosophila Mago nashi-Y14 complex.

Authors:  Hang Shi; Rui-Ming Xu
Journal:  Genes Dev       Date:  2003-04-15       Impact factor: 11.361

5.  Structure and function of the PWI motif: a novel nucleic acid-binding domain that facilitates pre-mRNA processing.

Authors:  Blair R Szymczyna; John Bowman; Susan McCracken; Antonio Pineda-Lucena; Ying Lu; Brian Cox; Mark Lambermon; Brenton R Graveley; Cheryl H Arrowsmith; Benjamin J Blencowe
Journal:  Genes Dev       Date:  2003-02-15       Impact factor: 11.361

6.  The structure of a replication initiator unites diverse aspects of nucleic acid metabolism.

Authors:  Ramon Campos-Olivas; John M Louis; Danielle Clerot; Bruno Gronenborn; Angela M Gronenborn
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-18       Impact factor: 11.205

7.  Selection of RRE RNA binding peptides using a kanamycin antitermination assay.

Authors:  Hadas Peled-Zehavi; Satoru Horiya; Chandreyee Das; Kazuo Harada; Alan D Frankel
Journal:  RNA       Date:  2003-02       Impact factor: 4.942

8.  Determinants within an 18-amino-acid U1A autoregulatory domain that uncouple cooperative RNA binding, inhibition of polyadenylation, and homodimerization.

Authors:  Fei Guan; Daphne Palacios; Reem I Hussein; Samuel I Gunderson
Journal:  Mol Cell Biol       Date:  2003-05       Impact factor: 4.272

9.  Prediction of RNA-binding proteins from primary sequence by a support vector machine approach.

Authors:  Lian Yi Han; Cong Zhong Cai; Siew Lin Lo; Maxey C M Chung; Yu Zong Chen
Journal:  RNA       Date:  2004-03       Impact factor: 4.942

10.  A new hydrogen-bonding potential for the design of protein-RNA interactions predicts specific contacts and discriminates decoys.

Authors:  Yu Chen; Tanja Kortemme; Tim Robertson; David Baker; Gabriele Varani
Journal:  Nucleic Acids Res       Date:  2004-09-30       Impact factor: 16.971

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