Literature DB >> 11173465

Exploration of the GM1 receptor-binding site of heat-labile enterotoxin and cholera toxin by phenyl-ring-containing galactose derivatives.

E Fan 1, E A Merritt, Z Zhang , J C Pickens, C Roach, M Ahn, W G Hol.   

Abstract

Cholera toxin (CT) and the closely related heat-labile enterotoxin of Escherichia coli (LT) are responsible for numerous cases of diarrhea worldwide, leading to considerable morbidity and mortality. The B subunits of these heterohexameric AB(5) toxins form a pentameric arrangement which is responsible for binding to the receptor GM1 of the target epithelial cells of the host. Blocking these B pentamer-receptor interactions forms an avenue for therapeutic intervention. Here, the structural characterization of potential receptor-blocking compounds are described based on the previously identified inhibitor m-nitrophenyl-alpha-D-galactoside (MNPG). The structure of a CTB-MNPG complex confirms that the binding mode of this inhibitor is identical in the two homologous toxins CT and LT and is characterized by a glycosyl linkage geometry that leads to displacement of a well ordered water molecule near the amide group of Gly33 by the O1-substituent of MNPG. This glycosyl geometry is not maintained in the absence of a substituent that can displace this water, as shown by a complex of LTB with p-aminophenyl-alpha-D-galactoside (PAPG). New compounds were synthesized to investigate the feasibility of maintaining the favorable binding interactions exhibited by MNPG while gaining increased affinity through the addition of hydrophobic substituents complementary to either of two hydrophobic regions of the receptor-binding site. The structural characterization of complexes of LTB with two of these compounds, 3-benzylaminocarbonylphenyl-alpha-D-galactoside (BAPG) and 2-phenethyl-7-(2,3-dihydrophthalazine-1,4-dione)-alpha-D-galactoside (PEPG), demonstrates a partial success in this goal. Both compounds exhibit a mixture of binding modes, some of which are presumably influenced by the local packing environment at multiple crystallographically independent binding sites. The terminal phenyl ring of BAPG associates either with the phenyl group of Tyr12 or with the hydrophobic patch formed by Lys34 and Ile58. The latter interaction is also made by the terminal phenyl substituent of PEPG, despite a larger ring system linking the galactose moiety to the terminal phenyl. However, neither BAPG nor PEPG displaces the intended target water molecule. Both of the designed compounds exhibit increased affinity relative to the galactose and to PAPG notwithstanding the failure to displace a bound water, confirming that additional favorable hydrophobic interactions can be gained by extending the starting inhibitor by a hydrophobic tail. The insight gained from these structures should allow the design of additional candidate inhibitors that retain both the glycosyl geometry and water displacement exhibited by MNPG and the favorable hydrophobic interactions exhibited by BAPG and PEPG.

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Year:  2001        PMID: 11173465     DOI: 10.1107/s0907444900016814

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  10 in total

1.  Analysis of a cholera toxin B subunit (CTB) and human mucin 1 (MUC1) conjugate protein in a MUC1-tolerant mouse model.

Authors:  Julia Pinkhasov; M Lucrecia Alvarez; Latha B Pathangey; Teresa L Tinder; Hugh S Mason; Amanda M Walmsley; Sandra J Gendler; Pinku Mukherjee
Journal:  Cancer Immunol Immunother       Date:  2010-09-08       Impact factor: 6.968

Review 2.  Heat-labile enterotoxin: beyond G(m1) binding.

Authors:  Benjamin Mudrak; Meta J Kuehn
Journal:  Toxins (Basel)       Date:  2010-06-14       Impact factor: 4.546

3.  Towards new cholera prophylactics and treatment: Crystal structures of bacterial enterotoxins in complex with GM1 mimics.

Authors:  Julie Elisabeth Heggelund; Alasdair Mackenzie; Tobias Martinsen; Joel Benjamin Heim; Pavel Cheshev; Anna Bernardi; Ute Krengel
Journal:  Sci Rep       Date:  2017-05-24       Impact factor: 4.379

4.  Exploring Multi-Subsite Binding Pockets in Proteins: DEEP-STD NMR Fingerprinting and Molecular Dynamics Unveil a Cryptic Subsite at the GM1 Binding Pocket of Cholera Toxin B.

Authors:  Serena Monaco; Samuel Walpole; Hassan Doukani; Ridvan Nepravishta; Macarena Martínez-Bailén; Ana T Carmona; Javier Ramos-Soriano; Maria Bergström; Inmaculada Robina; Jesus Angulo
Journal:  Chemistry       Date:  2020-07-20       Impact factor: 5.236

5.  π-Hole Interactions Involving Nitro Aromatic Ligands in Protein Structures.

Authors:  Antonio Bauzá; Antonio Frontera; Tiddo Jonathan Mooibroek
Journal:  Chemistry       Date:  2019-09-17       Impact factor: 5.236

6.  Bisindolylmaleimide IX: A novel anti-SARS-CoV2 agent targeting viral main protease 3CLpro demonstrated by virtual screening pipeline and in-vitro validation assays.

Authors:  Yash Gupta; Dawid Maciorowski; Samantha E Zak; Krysten A Jones; Rahul S Kathayat; Saara-Anne Azizi; Raman Mathur; Catherine M Pearce; David J Ilc; Hamza Husein; Andrew S Herbert; Ajay Bharti; Brijesh Rathi; Ravi Durvasula; Daniel P Becker; Bryan C Dickinson; John M Dye; Prakasha Kempaiah
Journal:  Methods       Date:  2021-01-14       Impact factor: 3.608

7.  Structure-activity correlations of variant forms of the B pentamer of Escherichia coli type II heat-labile enterotoxin LT-IIb with Toll-like receptor 2 binding.

Authors:  Vivian Cody; Jim Pace; Hesham F Nawar; Natalie King-Lyons; Shuang Liang; Terry D Connell; George Hajishengallis
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-11-09

8.  Quantitative Proteomic Analysis of Escherichia coli Heat-Labile Toxin B Subunit (LTB) with Enterovirus 71 (EV71) Subunit VP1.

Authors:  Lin Liu; Yongping Ma; Huicong Zhou; Mingjun Wu
Journal:  Int J Mol Sci       Date:  2016-08-27       Impact factor: 5.923

9.  Differential Epitope Mapping by STD NMR Spectroscopy To Reveal the Nature of Protein-Ligand Contacts.

Authors:  Serena Monaco; Louise E Tailford; Nathalie Juge; Jesus Angulo
Journal:  Angew Chem Int Ed Engl       Date:  2017-10-23       Impact factor: 15.336

10.  Biopolymer Extracted from Anadenanthera colubrina (Red Angico Gum) Exerts Therapeutic Potential in Mice: Antidiarrheal Activity and Safety Assessment.

Authors:  Thiago S L Araújo; Taiane M de Oliveira; Nayara A de Sousa; Luan K M Souza; Francisca B M Sousa; Ana P de Oliveira; Lucas A D Nicolau; Alfredo A V da Silva; Alyne R Araújo; Pedro J C Magalhães; Daniel F P Vasconcelos; Hugo R de Jonge; Marcellus H L P Souza; Durcilene A Silva; Regina C M Paula; Jand Venes R Medeiros
Journal:  Pharmaceuticals (Basel)       Date:  2020-01-18
  10 in total

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