Literature DB >> 11170426

QH*- ubisemiquinone radical in the bo3-type ubiquinol oxidase studied by pulsed electron paramagnetic resonance and hyperfine sublevel correlation spectroscopy.

S Grimaldi1, F MacMillan, T Ostermann, B Ludwig, H Michel, T Prisner.   

Abstract

The high-affinity QH ubiquinone-binding site in the bo(3) ubiquinol oxidase from Escherichia coli has been characterized by an investigation of the native ubiquinone radical anion QH(*-) by pulsed electron paramagnetic resonance (EPR) spectroscopy. One- and two-dimensional electron spin-echo envelope modulation (ESEEM) spectra reveal strong interactions of the unpaired electron of QH(*-) with a nitrogen nucleus from the surrounding protein matrix. From analysis of the experimental data, the (14)N nuclear quadrupolar parameters have been determined: kappa = e(2)qQ/4h = 0.93 MHz and eta = 0.50. This assignment is confirmed by hyperfine sublevel correlation (HYSCORE) spectroscopy. On the basis of a comparison of these data with those obtained previously for other membrane-protein bound semiquinone radicals and model systems, this nucleus is assigned to a protein backbone nitrogen. This result is discussed with regard to the location and potential function of QH in the enzyme.

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Year:  2001        PMID: 11170426     DOI: 10.1021/bi001641+

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  11 in total

1.  A caged, destabilized, free radical intermediate in the q-cycle.

Authors:  Preethi R Vennam; Nicholas Fisher; Matthew D Krzyaniak; David M Kramer; Michael K Bowman
Journal:  Chembiochem       Date:  2013-09-05       Impact factor: 3.164

2.  Pulse Q-band EPR and ENDOR spectroscopies of the photochemically generated monoprotonated benzosemiquinone radical in frozen alcoholic solution.

Authors:  Marco Flores; Melvin Y Okamura; Jens Niklas; Maria-Eirini Pandelia; Wolfgang Lubitz
Journal:  J Phys Chem B       Date:  2012-07-20       Impact factor: 2.991

3.  Interactions of intermediate semiquinone with surrounding protein residues at the Q(H) site of wild-type and D75H mutant cytochrome bo3 from Escherichia coli.

Authors:  Myat T Lin; Amgalanbaatar Baldansuren; Richard Hart; Rimma I Samoilova; Kuppala V Narasimhulu; Lai Lai Yap; Sylvia K Choi; Patrick J O'Malley; Robert B Gennis; Sergei A Dikanov
Journal:  Biochemistry       Date:  2012-04-22       Impact factor: 3.162

4.  The quinone-binding sites of the cytochrome bo3 ubiquinol oxidase from Escherichia coli.

Authors:  Lai Lai Yap; Myat T Lin; Hanlin Ouyang; Rimma I Samoilova; Sergei A Dikanov; Robert B Gennis
Journal:  Biochim Biophys Acta       Date:  2010-04-20

5.  Protein-cofactor interactions in bacterial reaction centers from Rhodobacter sphaeroides R-26: II. Geometry of the hydrogen bonds to the primary quinone formula by 1H and 2H ENDOR spectroscopy.

Authors:  M Flores; R Isaacson; E Abresch; R Calvo; W Lubitz; G Feher
Journal:  Biophys J       Date:  2006-10-27       Impact factor: 4.033

6.  A semiquinone intermediate generated at the Qo site of the cytochrome bc1 complex: importance for the Q-cycle and superoxide production.

Authors:  Jonathan L Cape; Michael K Bowman; David M Kramer
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-30       Impact factor: 11.205

7.  Q-Band Electron-Nuclear Double Resonance Reveals Out-of-Plane Hydrogen Bonds Stabilize an Anionic Ubisemiquinone in Cytochrome bo3 from Escherichia coli.

Authors:  Chang Sun; Alexander T Taguchi; Josh V Vermaas; Nathan J Beal; Patrick J O'Malley; Emad Tajkhorshid; Robert B Gennis; Sergei A Dikanov
Journal:  Biochemistry       Date:  2016-09-28       Impact factor: 3.162

8.  Identification of the nitrogen donor hydrogen bonded with the semiquinone at the Q(H) site of the cytochrome bo3 from Escherichia coli.

Authors:  Myat T Lin; Rimma I Samoilova; Robert B Gennis; Sergei A Dikanov
Journal:  J Am Chem Soc       Date:  2008-11-26       Impact factor: 15.419

9.  Direct evidence for nitrogen ligation to the high stability semiquinone intermediate in Escherichia coli nitrate reductase A.

Authors:  Stéphane Grimaldi; Rodrigo Arias-Cartin; Pascal Lanciano; Sevdalina Lyubenova; Burkhard Endeward; Thomas F Prisner; Axel Magalon; Bruno Guigliarelli
Journal:  J Biol Chem       Date:  2009-11-05       Impact factor: 5.157

10.  Coordination and binding geometry of methyl-coenzyme M in the red1m state of methyl-coenzyme M reductase.

Authors:  Dariush Hinderberger; Sieglinde Ebner; Stefan Mayr; Bernhard Jaun; Markus Reiher; Meike Goenrich; Rudolf K Thauer; Jeffrey Harmer
Journal:  J Biol Inorg Chem       Date:  2008-08-19       Impact factor: 3.358

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