Literature DB >> 11164034

Neutralism and selectionism: the molecular clock.

F J Ayala1.   

Abstract

The neutrality theory predicts that the rate of molecular evolution will be constant over time, and thus that there is a molecular clock for timing evolutionary events. It has been observed that the variance of the rate of evolution is generally larger than expected according to the neutrality theory. Several modifications of the theory have been proposed to account for the 'overdispersion' of the molecular clock, by postulating effects attributed to generation-time, population size, slightly deleterious mutations, repair mechanisms, and the like. An extensive investigation of two proteins, glycerol-3-phosphate dehydrogenase (GPDH) and superoxide dismutase (SOD), manifests that none of these modifications can simultaneously account for the disparate patterns observed in both proteins. GPDH evolves very slowly in Drosophila species, but several times faster in mammals, other animals, plants, and fungi. SOD evolves very fast in Drosophila species and also in mammals, but much more slowly in other animals and still slower when plants and fungi are compared to one another, or to animals.

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Year:  2000        PMID: 11164034     DOI: 10.1016/s0378-1119(00)00479-0

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  8 in total

1.  Mutator dynamics in fluctuating environments.

Authors:  J M J Travis; E R Travis
Journal:  Proc Biol Sci       Date:  2002-03-22       Impact factor: 5.349

2.  Molecular clock and gene function.

Authors:  Cecilia Saccone; Corrado Caggese; Anna Maria D'Erchia; Cecilia Lanave; Marta Oliva; Graziano Pesole
Journal:  J Mol Evol       Date:  2003       Impact factor: 2.395

Review 3.  Plant pathogen forensics: capabilities, needs, and recommendations.

Authors:  J Fletcher; C Bender; B Budowle; W T Cobb; S E Gold; C A Ishimaru; D Luster; U Melcher; R Murch; H Scherm; R C Seem; J L Sherwood; B W Sobral; S A Tolin
Journal:  Microbiol Mol Biol Rev       Date:  2006-06       Impact factor: 11.056

4.  Erratic overdispersion of three molecular clocks: GPDH, SOD, and XDH.

Authors:  F Rodríguez-Trelles; R Tarrío; F J Ayala
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-11       Impact factor: 11.205

5.  Molecular cloning, expression, and immunolocalization of the NAD(+)-dependent glycerol 3-phosphate dehydrogenase (GPD) from Clonorchis sinensis.

Authors:  Yongxiu Fan; Xiaoyun Wang; Chuanhuan Deng; Yan Huang; Lexun Wang; Wenjun Chen; Chi Liang; Xuerong Li; Zhongdao Wu; Xinbing Yu
Journal:  Parasitol Res       Date:  2011-03-16       Impact factor: 2.289

6.  Universal pacemaker of genome evolution in animals and fungi and variation of evolutionary rates in diverse organisms.

Authors:  Sagi Snir; Yuri I Wolf; Eugene V Koonin
Journal:  Genome Biol Evol       Date:  2014-05-07       Impact factor: 3.416

7.  Universal pacemaker of genome evolution.

Authors:  Sagi Snir; Yuri I Wolf; Eugene V Koonin
Journal:  PLoS Comput Biol       Date:  2012-11-29       Impact factor: 4.475

8.  Uncovering adaptive evolution in the human lineage.

Authors:  Magdalena Gayà-Vidal; M Mar Albà
Journal:  BMC Genomics       Date:  2014-07-16       Impact factor: 3.969

  8 in total

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