Literature DB >> 11159468

Time-resolved hole-burning study on myoglobin: fluctuation of restricted water within distal pocket.

Y Shibata1, H Ishikawa, S Takahashi, I Morishima.   

Abstract

We have studied the equilibrium fluctuation dynamics of Zn-substituted myoglobin and its His64-->Leu (H64L) mutant in the pH range from 5 to 9 by using time-resolved transient-hole-burning (TRTHB) spectroscopy. In the H64L mutant, we have observed a largely reduced width of the absorption spectrum and only a slight temporal shift of the hole-burning spectrum. These observations both reflect the suppressed conformational fluctuation in the mutant. On the other hand, the pH-dependent change in the absorption spectrum could not be solely explained by the change in the protonation state of His64 induced by the pH change. These results suggest that although the fluctuation dynamics observed by the TRTHB experiment of the native sample mainly reflects the conformational motion around His64, the interconversion process of His64 between its protonated and unprotonated states has a minor contribution. Instead, we have proposed a tentative interpretation that the motion of the water molecule around His64 is the main source of the observed dynamics in the TRTHB technique.

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Year:  2001        PMID: 11159468      PMCID: PMC1301299          DOI: 10.1016/S0006-3495(01)76080-8

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  23 in total

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Authors:  H Frauenfelder; S G Sligar; P G Wolynes
Journal:  Science       Date:  1991-12-13       Impact factor: 47.728

2.  Protein states and proteinquakes.

Authors:  A Ansari; J Berendzen; S F Bowne; H Frauenfelder; I E Iben; T B Sauke; E Shyamsunder; R D Young
Journal:  Proc Natl Acad Sci U S A       Date:  1985-08       Impact factor: 11.205

3.  Solvent viscosity and protein dynamics.

Authors:  D Beece; L Eisenstein; H Frauenfelder; D Good; M C Marden; L Reinisch; A H Reynolds; L B Sorensen; K T Yue
Journal:  Biochemistry       Date:  1980-11-11       Impact factor: 3.162

4.  Analysis of the kinetic barriers for ligand binding to sperm whale myoglobin using site-directed mutagenesis and laser photolysis techniques.

Authors:  T E Carver; R J Rohlfs; J S Olson; Q H Gibson; R S Blackmore; B A Springer; S G Sligar
Journal:  J Biol Chem       Date:  1990-11-15       Impact factor: 5.157

5.  Dynamics of ligand binding to myoglobin.

Authors:  R H Austin; K W Beeson; L Eisenstein; H Frauenfelder; I C Gunsalus
Journal:  Biochemistry       Date:  1975-12-02       Impact factor: 3.162

6.  Crystal structures of myoglobin-ligand complexes at near-atomic resolution.

Authors:  J Vojtechovský; K Chu; J Berendzen; R M Sweet; I Schlichting
Journal:  Biophys J       Date:  1999-10       Impact factor: 4.033

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Authors:  R Varadarajan; A Szabo; S G Boxer
Journal:  Proc Natl Acad Sci U S A       Date:  1985-09       Impact factor: 11.205

8.  Infrared spectroscopy of photodissociated carboxymyoglobin at low temperatures.

Authors:  J O Alben; D Beece; S F Bowne; W Doster; L Eisenstein; H Frauenfelder; D Good; J D McDonald; M C Marden; P P Moh; L Reinisch; A H Reynolds; E Shyamsunder; K T Yue
Journal:  Proc Natl Acad Sci U S A       Date:  1982-06       Impact factor: 11.205

9.  Quenching of the zinc-protoporphyrin triplet state as a measure of small-molecule diffusion through the structure of myoglobin.

Authors:  N Barboy; J Feitelson
Journal:  Biochemistry       Date:  1987-06-02       Impact factor: 3.162

10.  Diffusion of small molecules through the structure of myoglobin. Environmental effects.

Authors:  N Barboy; J Feitelson
Journal:  Biochemistry       Date:  1989-06-27       Impact factor: 3.162

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  1 in total

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Authors:  Sepideh Skandary; Martin Hussels; Alexander Konrad; Thomas Renger; Frank Müh; Martin Bommer; Athina Zouni; Alfred J Meixner; Marc Brecht
Journal:  J Phys Chem B       Date:  2015-03-10       Impact factor: 2.991

  1 in total

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