Literature DB >> 11158320

Distinctive features of Drosophila alternative splicing factor RS domain: implication for specific phosphorylation, shuttling, and splicing activation.

E Allemand1, R Gattoni, H M Bourbon, J Stevenin, J F Cáceres, J Soret, J Tazi.   

Abstract

The human splicing factor 2, also called human alternative splicing factor (hASF), is the prototype of the highly conserved SR protein family involved in constitutive and regulated splicing of metazoan mRNA precursors. Here we report that the Drosophila homologue of hASF (dASF) lacks eight repeating arginine-serine dipeptides at its carboxyl-terminal region (RS domain), previously shown to be important for both localization and splicing activity of hASF. While this difference has no effect on dASF localization, it impedes its capacity to shuttle between the nucleus and cytoplasm and abolishes its phosphorylation by SR protein kinase 1 (SRPK1). dASF also has an altered splicing activity. While being competent for the regulation of 5' alternative splice site choice and activation of specific splicing enhancers, dASF fails to complement S100-cytoplasmic splicing-deficient extracts. Moreover, targeted overexpression of dASF in transgenic flies leads to higher deleterious developmental defects than hASF overexpression, supporting the notion that the distinctive structural features at the RS domain between the two proteins are likely to be functionally relevant in vivo.

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Year:  2001        PMID: 11158320      PMCID: PMC99587          DOI: 10.1128/MCB.21.4.1345-1359.2001

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  64 in total

1.  A serine kinase regulates intracellular localization of splicing factors in the cell cycle.

Authors:  J F Gui; W S Lane; X D Fu
Journal:  Nature       Date:  1994-06-23       Impact factor: 49.962

2.  Contrasted cis-acting effects of downstream 5' splice sites on the splicing of a retained intron: the adenoviral E1A pre-mRNA model.

Authors:  M Popielarz; R Gattoni; J Stevenin
Journal:  Nucleic Acids Res       Date:  1993-11-11       Impact factor: 16.971

Review 3.  Ectopic expression in Drosophila.

Authors:  A H Brand; A S Manoukian; N Perrimon
Journal:  Methods Cell Biol       Date:  1994       Impact factor: 1.441

4.  The concentration of B52, an essential splicing factor and regulator of splice site choice in vitro, is critical for Drosophila development.

Authors:  M E Kraus; J T Lis
Journal:  Mol Cell Biol       Date:  1994-08       Impact factor: 4.272

5.  A yeast RNA-binding protein shuttles between the nucleus and the cytoplasm.

Authors:  J Flach; M Bossie; J Vogel; A Corbett; T Jinks; D A Willins; P A Silver
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

6.  The Drosophila RNA-binding protein RBP1 is localized to transcriptionally active sites of chromosomes and shows a functional similarity to human splicing factor ASF/SF2.

Authors:  Y J Kim; P Zuo; J L Manley; B S Baker
Journal:  Genes Dev       Date:  1992-12       Impact factor: 11.361

7.  Specific interactions between proteins implicated in splice site selection and regulated alternative splicing.

Authors:  J Y Wu; T Maniatis
Journal:  Cell       Date:  1993-12-17       Impact factor: 41.582

8.  Protein-protein interactions and 5'-splice-site recognition in mammalian mRNA precursors.

Authors:  J D Kohtz; S F Jamison; C L Will; P Zuo; R Lührmann; M A Garcia-Blanco; J L Manley
Journal:  Nature       Date:  1994-03-10       Impact factor: 49.962

9.  The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities.

Authors:  R Tacke; J L Manley
Journal:  EMBO J       Date:  1995-07-17       Impact factor: 11.598

10.  Characterization and cloning of the human splicing factor 9G8: a novel 35 kDa factor of the serine/arginine protein family.

Authors:  Y Cavaloc; M Popielarz; J P Fuchs; R Gattoni; J Stévenin
Journal:  EMBO J       Date:  1994-06-01       Impact factor: 11.598

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  17 in total

1.  Alternative splicing modulation by a LAMMER kinase impinges on developmental and transcriptome expression.

Authors:  Sigal Savaldi-Goldstein; Dvora Aviv; Olga Davydov; Robert Fluhr
Journal:  Plant Cell       Date:  2003-04       Impact factor: 11.277

2.  Selective modification of alternative splicing by indole derivatives that target serine-arginine-rich protein splicing factors.

Authors:  Johann Soret; Nadia Bakkour; Sophie Maire; Sébastien Durand; Latifa Zekri; Mathieu Gabut; Weronika Fic; Gilles Divita; Christian Rivalle; Daniel Dauzonne; Chi Hung Nguyen; Philippe Jeanteur; Jamal Tazi
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-06       Impact factor: 11.205

3.  Negative feedback regulation among SR splicing factors encoded by Rbp1 and Rbp1-like in Drosophila.

Authors:  Supriya Kumar; A Javier Lopez
Journal:  EMBO J       Date:  2005-06-16       Impact factor: 11.598

4.  A Drosophila model of FUS-related neurodegeneration reveals genetic interaction between FUS and TDP-43.

Authors:  Nicholas A Lanson; Astha Maltare; Hanna King; Rebecca Smith; Ji Han Kim; J Paul Taylor; Thomas E Lloyd; Udai Bhan Pandey
Journal:  Hum Mol Genet       Date:  2011-04-12       Impact factor: 6.150

5.  Phosphorylation status of the Kep1 protein alters its affinity for its protein binding partner alternative splicing factor ASF/SF2.

Authors:  Cécile Robard; Alex Daviau; Marco Di Fruscio
Journal:  Biochem J       Date:  2006-11-15       Impact factor: 3.857

6.  Protein kinase a-dependent phosphorylation of serine 119 in the proto-oncogenic serine/arginine-rich splicing factor 1 modulates its activity as a splicing enhancer protein.

Authors:  Anne Kristin Aksaas; Sissel Eikvar; Göran Akusjärvi; Bjørn S Skålhegg; Anne Katrine Kvissel
Journal:  Genes Cancer       Date:  2011-08

7.  The maize zmsmu2 gene encodes a putative RNA-splicing factor that affects protein synthesis and RNA processing during endosperm development.

Authors:  Taijoon Chung; Cheol Soo Kim; Hong N Nguyen; Robert B Meeley; Brian A Larkins
Journal:  Plant Physiol       Date:  2007-03-23       Impact factor: 8.340

8.  DX16 is a novel SR protein phosphorylated by DOA.

Authors:  Yongqi Wan; Mingkuan Sun; Shanzhi Wang; Li Liu; Liudi Yuan; Wei Xie
Journal:  Mol Cell Biochem       Date:  2007-09-09       Impact factor: 3.396

9.  The SR family proteins B52 and dASF/SF2 modulate development of the Drosophila visual system by regulating specific RNA targets.

Authors:  Mathieu Gabut; Jérôme Dejardin; Jamal Tazi; Johann Soret
Journal:  Mol Cell Biol       Date:  2007-02-05       Impact factor: 4.272

10.  A conserved Drosophila transportin-serine/arginine-rich (SR) protein permits nuclear import of Drosophila SR protein splicing factors and their antagonist repressor splicing factor 1.

Authors:  Eric Allemand; Svetlana Dokudovskaya; Rémy Bordonné; Jamal Tazi
Journal:  Mol Biol Cell       Date:  2002-07       Impact factor: 4.138

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