Literature DB >> 11156611

Pyrosequencing sheds light on DNA sequencing.

M Ronaghi1.   

Abstract

DNA sequencing is one of the most important platforms for the study of biological systems today. Sequence determination is most commonly performed using dideoxy chain termination technology. Recently, pyrosequencing has emerged as a new sequencing methodology. This technique is a widely applicable, alternative technology for the detailed characterization of nucleic acids. Pyrosequencing has the potential advantages of accuracy, flexibility, parallel processing, and can be easily automated. Furthermore, the technique dispenses with the need for labeled primers, labeled nucleotides, and gel-electrophoresis. This article considers key features regarding different aspects of pyrosequencing technology, including the general principles, enzyme properties, sequencing modes, instrumentation, and potential applications.

Mesh:

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Year:  2001        PMID: 11156611     DOI: 10.1101/gr.11.1.3

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  178 in total

1.  Multiplex Pyrosequencing.

Authors:  Nader Pourmand; Elahe Elahi; Ronald W Davis; Mostafa Ronaghi
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

Review 2.  Methods for molecular surveillance of influenza.

Authors:  Ruixue Wang; Jeffery K Taubenberger
Journal:  Expert Rev Anti Infect Ther       Date:  2010-05       Impact factor: 5.091

3.  Droplet-based pyrosequencing using digital microfluidics.

Authors:  Deborah J Boles; Jonathan L Benton; Germaine J Siew; Miriam H Levy; Prasanna K Thwar; Melissa A Sandahl; Jeremy L Rouse; Lisa C Perkins; Arjun P Sudarsan; Roxana Jalili; Vamsee K Pamula; Vijay Srinivasan; Richard B Fair; Peter B Griffin; Allen E Eckhardt; Michael G Pollack
Journal:  Anal Chem       Date:  2011-10-14       Impact factor: 6.986

4.  A novel method for preparing single-stranded DNA for pyrosequencing.

Authors:  Matthew A Diggle; Stuart C Clarke
Journal:  Mol Biotechnol       Date:  2003-06       Impact factor: 2.695

5.  Microfluidic device reads up to four consecutive base pairs in DNA sequencing-by-synthesis.

Authors:  Emil P Kartalov; Stephen R Quake
Journal:  Nucleic Acids Res       Date:  2004-05-20       Impact factor: 16.971

Review 6.  Pyrosequencing: sequence typing at the speed of light.

Authors:  Matthew A Diggle; Stuart C Clarke
Journal:  Mol Biotechnol       Date:  2004-10       Impact factor: 2.695

Review 7.  Genotypic characterization of Neisseria meningitidis using Pyrosequencing.

Authors:  Matthew A Diggle; Stuart C Clarke
Journal:  Mol Biotechnol       Date:  2004-10       Impact factor: 2.695

Review 8.  Vaginal microbiome and sexually transmitted infections: an epidemiologic perspective.

Authors:  Rebecca M Brotman
Journal:  J Clin Invest       Date:  2011-12-01       Impact factor: 14.808

Review 9.  The human microbiome and its potential importance to pediatrics.

Authors:  Coreen L Johnson; James Versalovic
Journal:  Pediatrics       Date:  2012-04-02       Impact factor: 7.124

10.  Single-nucleotide polymorphism genotyping on optical thin-film biosensor chips.

Authors:  Xiao-Bo Zhong; Robert Reynolds; Judith R Kidd; Kenneth K Kidd; Robert Jenison; Richard A Marlar; David C Ward
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-15       Impact factor: 11.205

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