Literature DB >> 11153914

Genomic structure and fine mapping of the two human filamin gene paralogues FLNB and FLNC and comparative analysis of the filamin gene family.

C Chakarova1, M S Wehnert, K Uhl, S Sakthivel, H P Vosberg, P F van der Ven, D O Fürst.   

Abstract

The genomic structure of the filamin gene paralogues FLNB and FLNC was determined and related to FLNA. FLNB consists of 45 exons and 44 introns and spans approximately 80 kb of genomic DNA. FLNC is divided into 48 exons and 47 introns and covers approximately 29.5 kb of genomic DNA. A previously unknown intron was found in FLNA. The comparison of all three filamin gene paralogues revealed a highly conserved exon-intron structure with significant differences in the exons 32 of all paralogues encoding the hinge I region, as well as the insertion of a novel exon 40A in FLNC only. Gene organization does not correlate with the domain structures of the respective proteins. To improve candidate gene cloning approaches, FLNB was precisely mapped at 3p14 in an interval of 0.81 cM between WI3771 and WI6691 and FLNC at 7q32 in an interval of 2.07 cM between D7S530 and D7S649.

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Year:  2000        PMID: 11153914     DOI: 10.1007/s004390000414

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  35 in total

1.  Interpolated markov chains for eukaryotic promoter recognition.

Authors:  U Ohler; S Harbeck; H Niemann; E Nöth; M G Reese
Journal:  Bioinformatics       Date:  1999-05       Impact factor: 6.937

2.  Predicting Pol II promoter sequences using transcription factor binding sites.

Authors:  D S Prestridge
Journal:  J Mol Biol       Date:  1995-06-23       Impact factor: 5.469

3.  The gelation of actin by actin-binding protein.

Authors:  E A Brotschi; J H Hartwig; T P Stossel
Journal:  J Biol Chem       Date:  1978-12-25       Impact factor: 5.157

4.  Self-association of chicken gizzard filamin and heavy merofilamin.

Authors:  P J Davies; D Wallach; M Willingham; I Pastan; M S Lewis
Journal:  Biochemistry       Date:  1980-04-01       Impact factor: 3.162

5.  Interaction of filamin with f-actin in solution.

Authors:  K Wang; S J Singer
Journal:  Proc Natl Acad Sci U S A       Date:  1977-05       Impact factor: 11.205

6.  Mutations in filamin 1 prevent migration of cerebral cortical neurons in human periventricular heterotopia.

Authors:  J W Fox; E D Lamperti; Y Z Ekşioğlu; S E Hong; Y Feng; D A Graham; I E Scheffer; W B Dobyns; B A Hirsch; R A Radtke; S F Berkovic; P R Huttenlocher; C A Walsh
Journal:  Neuron       Date:  1998-12       Impact factor: 17.173

7.  Direct interaction of filamin (ABP-280) with the beta 2-integrin subunit CD18.

Authors:  C P Sharma; R M Ezzell; M A Arnaout
Journal:  J Immunol       Date:  1995-04-01       Impact factor: 5.422

8.  Filamin 2 (FLN2): A muscle-specific sarcoglycan interacting protein.

Authors:  T G Thompson; Y M Chan; A A Hack; M Brosius; M Rajala; H G Lidov; E M McNally; S Watkins; L M Kunkel
Journal:  J Cell Biol       Date:  2000-01-10       Impact factor: 10.539

9.  The architecture of actin filaments and the ultrastructural location of actin-binding protein in the periphery of lung macrophages.

Authors:  J H Hartwig; P Shevlin
Journal:  J Cell Biol       Date:  1986-09       Impact factor: 10.539

10.  Human endothelial actin-binding protein (ABP-280, nonmuscle filamin): a molecular leaf spring.

Authors:  J B Gorlin; R Yamin; S Egan; M Stewart; T P Stossel; D J Kwiatkowski; J H Hartwig
Journal:  J Cell Biol       Date:  1990-09       Impact factor: 10.539

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  14 in total

1.  Comprehensive multi-stage linkage analyses identify a locus for adult height on chromosome 3p in a healthy Caucasian population.

Authors:  Justine A Ellis; Katrina J Scurrah; Anna E Duncan; Angela Lamantia; Graham B Byrnes; Stephen B Harrap
Journal:  Hum Genet       Date:  2006-12-20       Impact factor: 4.132

2.  Filamin A (FLNA) is required for cell-cell contact in vascular development and cardiac morphogenesis.

Authors:  Yuanyi Feng; Ming Hui Chen; Ivan P Moskowitz; Ashley M Mendonza; Luis Vidali; Fumihiko Nakamura; David J Kwiatkowski; Christopher A Walsh
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-15       Impact factor: 11.205

3.  Mutations responsible for Larsen syndrome cluster in the FLNB protein.

Authors:  D Zhang; J A Herring; S S Swaney; T B McClendon; X Gao; R H Browne; K E Rathjen; C E Johnston; S Harris; N M Cain; C A Wise
Journal:  J Med Genet       Date:  2006-05       Impact factor: 6.318

4.  Mechanisms and Effects on HBV Replication of the Interaction between HBV Core Protein and Cellular Filamin B.

Authors:  Yilin Li; Yishuang Sun; Fuyun Sun; Rong Hua; Chenlin Li; Lang Chen; Deyin Guo; Jingfang Mu
Journal:  Virol Sin       Date:  2018-03-28       Impact factor: 4.327

5.  Opposing FlnA and FlnB interactions regulate RhoA activation in guiding dynamic actin stress fiber formation and cell spreading.

Authors:  Jianjun Hu; Jie Lu; Akshay Goyal; Timothy Wong; Gewei Lian; Jingping Zhang; Jonathan L Hecht; Yuanyi Feng; Volney L Sheen
Journal:  Hum Mol Genet       Date:  2017-04-01       Impact factor: 6.150

Review 6.  Filamin C in cardiomyopathy: from physiological roles to DNA variants.

Authors:  Shen Song; Anteng Shi; Hong Lian; Shengshou Hu; Yu Nie
Journal:  Heart Fail Rev       Date:  2021-09-17       Impact factor: 4.654

7.  Filamin C-related myopathies: pathology and mechanisms.

Authors:  Dieter O Fürst; Lev G Goldfarb; Rudolf A Kley; Matthias Vorgerd; Montse Olivé; Peter F M van der Ven
Journal:  Acta Neuropathol       Date:  2012-10-30       Impact factor: 17.088

8.  Different splice variants of filamin-B affect myogenesis, subcellular distribution, and determine binding to integrin [beta] subunits.

Authors:  Arjan van der Flier; Ingrid Kuikman; Duco Kramer; Dirk Geerts; Maaike Kreft; Toshiro Takafuta; Sandor S Shapiro; Arnoud Sonnenberg
Journal:  J Cell Biol       Date:  2002-01-21       Impact factor: 10.539

Review 9.  Periventricular Heterotopia: Shuttling of Proteins through Vesicles and Actin in Cortical Development and Disease.

Authors:  Volney L Sheen
Journal:  Scientifica (Cairo)       Date:  2012-10-22

10.  A mutation update for the FLNC gene in myopathies and cardiomyopathies.

Authors:  Job A J Verdonschot; Els K Vanhoutte; Godelieve R F Claes; Apollonia T J M Helderman-van den Enden; Janneke G J Hoeijmakers; Debby M E I Hellebrekers; Amber de Haan; Imke Christiaans; Ronald H Lekanne Deprez; Hanne M Boen; Emeline M van Craenenbroeck; Bart L Loeys; Yvonne M Hoedemaekers; Carlo Marcelis; Marlies Kempers; Esther Brusse; Jaap I van Waning; Annette F Baas; Dennis Dooijes; Folkert W Asselbergs; Daniela Q C M Barge-Schaapveld; Pieter Koopman; Arthur van den Wijngaard; Stephane R B Heymans; Ingrid P C Krapels; Han G Brunner
Journal:  Hum Mutat       Date:  2020-03-20       Impact factor: 4.878

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