Literature DB >> 11152891

Genomic exploration of the hemiascomycetous yeasts: 16. Candida tropicalis.

G Blandin1, O Ozier-Kalogeropoulos, P Wincker, F Artiguenave, B Dujon.   

Abstract

The genome of the diploid hemiascomycetous yeast Candida tropicalis, an opportunistic human pathogen and an important organism for industrial applications, was explored by the analysis of 2541 Random Sequenced Tags (RSTs) covering about 20% of its genome. Comparison of these sequences with Saccharomyces cerevisiae and other species permitted the identification and the analysis of a total of more than 1000 novel genetic elements of C. tropicalis. Moreover, the present study confirms that in C. tropicalis, the rare CUG codon is read as a serine and not a leucine. The sequences have been deposited at EMBL with the accession numbers AL438875-AL441602.

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Year:  2000        PMID: 11152891     DOI: 10.1016/s0014-5793(00)02287-0

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  9 in total

1.  Expression of the Candida albicans morphogenesis regulator gene CZF1 and its regulation by Efg1p and Czf1p.

Authors:  Marcelo D Vinces; Christopher Haas; Carol A Kumamoto
Journal:  Eukaryot Cell       Date:  2006-05

2.  Multilocus sequence typing for differentiation of strains of Candida tropicalis.

Authors:  Arianna Tavanti; Amanda D Davidson; Elizabeth M Johnson; Martin C J Maiden; Duncan J Shaw; Neil A R Gow; Frank C Odds
Journal:  J Clin Microbiol       Date:  2005-11       Impact factor: 5.948

3.  Molecular evolution of eukaryotic genomes: hemiascomycetous yeast spliceosomal introns.

Authors:  Elisabeth Bon; Serge Casaregola; Gaëlle Blandin; Bertrand Llorente; Cécile Neuvéglise; Martin Munsterkotter; Ulrich Guldener; Hans-Werner Mewes; Jacques Van Helden; Bernard Dujon; Claude Gaillardin
Journal:  Nucleic Acids Res       Date:  2003-02-15       Impact factor: 16.971

4.  Genomic evolution of the long terminal repeat retrotransposons in hemiascomycetous yeasts.

Authors:  Cécile Neuvéglise; Horst Feldmann; Elisabeth Bon; Claude Gaillardin; Serge Casaregola
Journal:  Genome Res       Date:  2002-06       Impact factor: 9.043

5.  Fungal secretome database: integrated platform for annotation of fungal secretomes.

Authors:  Jaeyoung Choi; Jongsun Park; Donghan Kim; Kyongyong Jung; Seogchan Kang; Yong-Hwan Lee
Journal:  BMC Genomics       Date:  2010-02-11       Impact factor: 3.969

6.  LTR retrotransposons in fungi.

Authors:  Anna Muszewska; Marta Hoffman-Sommer; Marcin Grynberg
Journal:  PLoS One       Date:  2011-12-29       Impact factor: 3.240

Review 7.  An Update on Candida tropicalis Based on Basic and Clinical Approaches.

Authors:  Diana L Zuza-Alves; Walicyranison P Silva-Rocha; Guilherme M Chaves
Journal:  Front Microbiol       Date:  2017-10-13       Impact factor: 5.640

8.  SNUGB: a versatile genome browser supporting comparative and functional fungal genomics.

Authors:  Kyongyong Jung; Jongsun Park; Jaeyoung Choi; Bongsoo Park; Seungill Kim; Kyohun Ahn; Jaehyuk Choi; Doil Choi; Seogchan Kang; Yong-Hwan Lee
Journal:  BMC Genomics       Date:  2008-12-04       Impact factor: 3.969

9.  Genome Sequence of Candida tropicalis no. 121, Used for RNA Production.

Authors:  Bingbing Li; Ting Guo; Yong Chen; Jingjing Xie; Huanqing Niu; Dong Liu; Jian Cheng; Xiaochun Chen; Jinglan Wu; Wei Zhuang; Chenjie Zhu; Hanjie Ying
Journal:  Genome Announc       Date:  2014-05-15
  9 in total

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