Literature DB >> 11148211

A novel member of the bacterial-archaeal regulator family is a nonspecific dna-binding protein and induces positive supercoiling.

A Napoli1, M Kvaratskelia, M F White, M Rossi, M Ciaramella.   

Abstract

In hyperthermophilic Archaea genomic DNA is from relaxed to positively supercoiled in vivo because of the action of the enzyme reverse gyrase, and this peculiarity is believed to be related to stabilization of DNA against denaturation. We report the identification and characterization of Smj12, a novel protein of Sulfolobus solfataricus, which is homologous to members of the so-called Bacterial-Archaeal family of regulators, found in multiple copies in Eubacteria and Archaea. Whereas other members of the family are sequence-specific DNA- binding proteins and have been implicated in transcriptional regulation, Smj12 is a nonspecific DNA-binding protein that stabilizes the double helix and induces positive supercoiling. Smj12 is not abundant, suggesting that it is not a general architectural protein, but rather has a specialized function and/or localization. Smj12 is the first protein with the described features identified in Archaea and might participate in control of superhelicity during DNA transactions.

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Year:  2001        PMID: 11148211     DOI: 10.1074/jbc.M010611200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  12 in total

1.  Identification, cloning and characterization of a new DNA-binding protein from the hyperthermophilic methanogen Methanopyrus kandleri.

Authors:  Nikolai A Pavlov; Dmitry I Cherny; Igor V Nazimov; Alexei I Slesarev; Vinod Subramaniam
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

Review 2.  The interplay between nucleoid organization and transcription in archaeal genomes.

Authors:  Eveline Peeters; Rosalie P C Driessen; Finn Werner; Remus T Dame
Journal:  Nat Rev Microbiol       Date:  2015-05-06       Impact factor: 60.633

3.  A complete sequence of the T. tengcongensis genome.

Authors:  Qiyu Bao; Yuqing Tian; Wei Li; Zuyuan Xu; Zhenyu Xuan; Songnian Hu; Wei Dong; Jian Yang; Yanjiong Chen; Yanfen Xue; Yi Xu; Xiaoqin Lai; Li Huang; Xiuzhu Dong; Yanhe Ma; Lunjiang Ling; Huarong Tan; Runsheng Chen; Jian Wang; Jun Yu; Huanming Yang
Journal:  Genome Res       Date:  2002-05       Impact factor: 9.043

4.  Transcriptional response to DNA damage in the archaeon Sulfolobus solfataricus.

Authors:  Vincenzo Salerno; Alessandra Napoli; Malcolm F White; Mosè Rossi; Maria Ciaramella
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

5.  DNA bending, compaction and negative supercoiling by the architectural protein Sso7d of Sulfolobus solfataricus.

Authors:  Alessandra Napoli; Yvan Zivanovic; Chantal Bocs; Cyril Buhler; Mose' Rossi; Patrick Forterre; Maria Ciaramella
Journal:  Nucleic Acids Res       Date:  2002-06-15       Impact factor: 16.971

6.  Selective degradation of reverse gyrase and DNA fragmentation induced by alkylating agent in the archaeon Sulfolobus solfataricus.

Authors:  Anna Valenti; Alessandra Napoli; Maria Carmina Ferrara; Marc Nadal; Mosè Rossi; Maria Ciaramella
Journal:  Nucleic Acids Res       Date:  2006-04-14       Impact factor: 16.971

7.  Functional interaction of reverse gyrase with single-strand binding protein of the archaeon Sulfolobus.

Authors:  Alessandra Napoli; Anna Valenti; Vincenzo Salerno; Marc Nadal; Florence Garnier; Mosè Rossi; Maria Ciaramella
Journal:  Nucleic Acids Res       Date:  2005-01-26       Impact factor: 16.971

8.  Sa-Lrp from Sulfolobus acidocaldarius is a versatile, glutamine-responsive, and architectural transcriptional regulator.

Authors:  Amelia Vassart; Marleen Van Wolferen; Alvaro Orell; Ye Hong; Eveline Peeters; Sonja-Verena Albers; Daniel Charlier
Journal:  Microbiologyopen       Date:  2012-12-16       Impact factor: 3.139

9.  DNA protection by histone-like protein HU from the hyperthermophilic eubacterium Thermotoga maritima.

Authors:  Anirban Mukherjee; Abimbola O Sokunbi; Anne Grove
Journal:  Nucleic Acids Res       Date:  2008-05-30       Impact factor: 16.971

10.  Dissection of reverse gyrase activities: insight into the evolution of a thermostable molecular machine.

Authors:  Anna Valenti; Giuseppe Perugino; Anna D'Amaro; Andrea Cacace; Alessandra Napoli; Mosè Rossi; Maria Ciaramella
Journal:  Nucleic Acids Res       Date:  2008-07-09       Impact factor: 16.971

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