Literature DB >> 11125064

The Medicago Genome Initiative: a model legume database.

C J Bell1, R A Dixon, A D Farmer, R Flores, J Inman, R A Gonzales, M J Harrison, N L Paiva, A D Scott, J W Weller, G D May.   

Abstract

The Medicago Genome Initiative (MGI) is a database of EST sequences of the model legume MEDICAGO: truncatula. The database is available to the public and has resulted from a collaborative research effort between the Samuel Roberts Noble Foundation and the National Center for Genome Resources to investigate the genome of M.truncatula. MGI is part of the greater integrated MEDICAGO: functional genomics program at the Noble Foundation (http://www.noble.org ), which is taking a global approach in studying the genetic and biochemical events associated with the growth, development and environmental interactions of this model legume. Our approach will include: large-scale EST sequencing, gene expression profiling, the generation of M.truncatula activation-tagged and promoter trap insertion mutants, high-throughput metabolic profiling, and proteome studies. These multidisciplinary information pools will be interfaced with one another to provide scientists with an integrated, holistic set of tools to address fundamental questions pertaining to legume biology. The public interface to the MGI database can be accessed at http://www.ncgr.org/research/mgi.

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Year:  2001        PMID: 11125064      PMCID: PMC29836          DOI: 10.1093/nar/29.1.114

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  4 in total

1.  Medicago truncatula--a model in the making!

Authors:  D R Cook
Journal:  Curr Opin Plant Biol       Date:  1999-08       Impact factor: 7.834

2.  The phytophthora genome initiative database: informatics and analysis for distributed pathogenomic research.

Authors:  M Waugh; P Hraber; J Weller; Y Wu; G Chen; J Inman; D Kiphart; B Sobral
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 3.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

4.  Transformation of Medicago truncatula via infiltration of seedlings or flowering plants with Agrobacterium.

Authors:  A T Trieu; S H Burleigh; I V Kardailsky; I E Maldonado-Mendoza; W K Versaw; L A Blaylock; H Shin; T J Chiou; H Katagi; G R Dewbre; D Weigel; M J Harrison
Journal:  Plant J       Date:  2000-06       Impact factor: 6.417

  4 in total
  34 in total

1.  Medicago truncatula on the move!

Authors:  J Frugoli; J Harris
Journal:  Plant Cell       Date:  2001-03       Impact factor: 11.277

Review 2.  Proteomics as a tool to monitor plant-microbe endosymbioses in the rhizosphere.

Authors:  G Bestel-Corre; E Dumas-Gaudot; S Gianinazzi
Journal:  Mycorrhiza       Date:  2003-11-19       Impact factor: 3.387

Review 3.  Molecular and cell biology of arbuscular mycorrhizal symbiosis.

Authors:  Bettina Hause; Thomas Fester
Journal:  Planta       Date:  2004-11-26       Impact factor: 4.116

4.  An expression database for roots of the model legume Medicago truncatula under salt stress.

Authors:  Daofeng Li; Zhen Su; Jiangli Dong; Tao Wang
Journal:  BMC Genomics       Date:  2009-11-11       Impact factor: 3.969

5.  Mapping the proteome of barrel medic (Medicago truncatula).

Authors:  Bonnie S Watson; Victor S Asirvatham; Liangjiang Wang; Lloyd W Sumner
Journal:  Plant Physiol       Date:  2003-03       Impact factor: 8.340

6.  Expression of the apyrase-like APY1 genes in roots of Medicago truncatula is induced rapidly and transiently by stress and not by Sinorhizobium meliloti or Nod factors.

Authors:  Maria-Teresa Navarro-Gochicoa; Sylvie Camut; Andreas Niebel; Julie V Cullimore
Journal:  Plant Physiol       Date:  2003-03       Impact factor: 8.340

7.  Proteomics of Medicago truncatula seed development establishes the time frame of diverse metabolic processes related to reserve accumulation.

Authors:  Karine Gallardo; Christine Le Signor; Joël Vandekerckhove; Richard D Thompson; Judith Burstin
Journal:  Plant Physiol       Date:  2003-09-11       Impact factor: 8.340

8.  Transcriptome analysis of alfalfa glandular trichomes.

Authors:  Naveed Aziz; Nancy L Paiva; Gregory D May; Richard A Dixon
Journal:  Planta       Date:  2004-12-02       Impact factor: 4.116

9.  A natural variant of a host RNA-dependent RNA polymerase is associated with increased susceptibility to viruses by Nicotiana benthamiana.

Authors:  Shu-Jun Yang; Shelly A Carter; Anthony B Cole; Ning-Hui Cheng; Richard S Nelson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-12       Impact factor: 11.205

10.  Differential expression of the TFIIIA regulatory pathway in response to salt stress between Medicago truncatula genotypes.

Authors:  Laura de Lorenzo; Francisco Merchan; Sandrine Blanchet; Manuel Megías; Florian Frugier; Martin Crespi; Carolina Sousa
Journal:  Plant Physiol       Date:  2007-10-19       Impact factor: 8.340

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