Literature DB >> 11125056

WormBase: network access to the genome and biology of Caenorhabditis elegans.

L Stein1, P Sternberg, R Durbin, J Thierry-Mieg, J Spieth.   

Abstract

WormBase (http://www.wormbase.org) is a web-based resource for the Caenorhabditis elegans genome and its biology. It builds upon the existing ACeDB database of the C.elegans genome by providing data curation services, a significantly expanded range of subject areas and a user-friendly front end.

Entities:  

Mesh：

Year:  2001        PMID： 11125056      PMCID： PMC29781          DOI： 10.1093/nar/29.1.82

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  9 in total

1.  The intronerator: exploring introns and alternative splicing in Caenorhabditis elegans.

Authors:  W J Kent; A M Zahler
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.

Authors:  M Ashburner; C A Ball; J A Blake; D Botstein; H Butler; J M Cherry; A P Davis; K Dolinski; S S Dwight; J T Eppig; M A Harris; D P Hill; L Issel-Tarver; A Kasarskis; S Lewis; J C Matese; J E Richardson; M Ringwald; G M Rubin; G Sherlock
Journal:  Nat Genet       Date:  2000-05       Impact factor: 38.330

3.  Promoter trapping identifies real genes in C. elegans.

Authors:  I A Hope; J M Arnold; D McCarroll; G Jun; A P Krupa; R Herbert
Journal:  Mol Gen Genet       Date:  1998-11

4.  Scriptable access to the Caenorhabditis elegans genome sequence and other ACEDB databases.

Authors:  L D Stein; J Thierry-Mieg
Journal:  Genome Res       Date:  1998-12       Impact factor: 9.043

5.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

Review 6.  [Large scale analysis of C. elegans cDNA].

Authors:  Y Kohara
Journal:  Tanpakushitsu Kakusan Koso       Date:  1996-04

7.  The embryonic cell lineage of the nematode Caenorhabditis elegans.

Authors:  J E Sulston; E Schierenberg; J G White; J N Thomson
Journal:  Dev Biol       Date:  1983-11       Impact factor: 3.582

8.  The postembryonic cell lineages of the hermaphrodite and male gonads in Caenorhabditis elegans.

Authors:  J Kimble; D Hirsh
Journal:  Dev Biol       Date:  1979-06       Impact factor: 3.582

Review 9.  Genome sequence of the nematode C. elegans: a platform for investigating biology.

Authors: 
Journal:  Science       Date:  1998-12-11       Impact factor: 47.728
  9 in total
  129 in total

1.  A protein-protein interaction map of the Caenorhabditis elegans 26S proteasome.

Authors:  A Davy; P Bello; N Thierry-Mieg; P Vaglio; J Hitti; L Doucette-Stamm; D Thierry-Mieg; J Reboul; S Boulton; A J Walhout; O Coux; M Vidal
Journal:  EMBO Rep       Date:  2001-09       Impact factor: 8.807

2.  GeneLynx: a gene-centric portal to the human genome.

Authors:  B Lenhard; W S Hayes; W W Wasserman
Journal:  Genome Res       Date:  2001-12       Impact factor: 9.043

3.  Levels of DNA polymorphism vary with mating system in the nematode genus caenorhabditis.

Authors:  Andrew Graustein; John M Gaspar; James R Walters; Michael F Palopoli
Journal:  Genetics       Date:  2002-05       Impact factor: 4.562

4.  The human genome browser at UCSC.

Authors:  W James Kent; Charles W Sugnet; Terrence S Furey; Krishna M Roskin; Tom H Pringle; Alan M Zahler; David Haussler
Journal:  Genome Res       Date:  2002-06       Impact factor: 9.043

5.  A literature-based method for assessing the functional coherence of a gene group.

Authors:  Soumya Raychaudhuri; Russ B Altman
Journal:  Bioinformatics       Date:  2003-02-12       Impact factor: 6.937

6.  Glutamine/proline-rich PQE-1 proteins protect Caenorhabditis elegans neurons from huntingtin polyglutamine neurotoxicity.

Authors:  Peter W Faber; Cindy Voisine; Daphne C King; Emily A Bates; Anne C Hart
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-16       Impact factor: 11.205

7.  Description of International Caenorhabditis elegans Experiment first flight (ICE-FIRST).

Authors:  N J Szewczyk; J Tillman; C A Conley; L Granger; L Segalat; A Higashitani; S Honda; Y Honda; H Kagawa; R Adachi; A Higashibata; N Fujimoto; K Kuriyama; N Ishioka; K Fukui; D Baillie; A Rose; G Gasset; B Eche; D Chaput; M Viso
Journal:  Adv Space Res       Date:  2008-09-15       Impact factor: 2.152

8.  Evidence for a diverse Cys-loop ligand-gated ion channel superfamily in early bilateria.

Authors:  Joseph A Dent
Journal:  J Mol Evol       Date:  2006-04-01       Impact factor: 2.395

9.  Identification and analysis of internal promoters in Caenorhabditis elegans operons.

Authors:  Peiming Huang; Erin D Pleasance; Jason S Maydan; Rebecca Hunt-Newbury; Nigel J O'Neil; Allan Mah; David L Baillie; Marco A Marra; Donald G Moerman; Steven J M Jones
Journal:  Genome Res       Date:  2007-08-21       Impact factor: 9.043

10.  WormBase: a multi-species resource for nematode biology and genomics.

Authors:  Todd W Harris; Nansheng Chen; Fiona Cunningham; Marcela Tello-Ruiz; Igor Antoshechkin; Carol Bastiani; Tamberlyn Bieri; Darin Blasiar; Keith Bradnam; Juancarlos Chan; Chao-Kung Chen; Wen J Chen; Paul Davis; Eimear Kenny; Ranjana Kishore; Daniel Lawson; Raymond Lee; Hans-Michael Muller; Cecilia Nakamura; Philip Ozersky; Andrei Petcherski; Anthony Rogers; Aniko Sabo; Erich M Schwarz; Kimberly Van Auken; Qinghua Wang; Richard Durbin; John Spieth; Paul W Sternberg; Lincoln D Stein
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971
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