Literature DB >> 11123986

Design of adenosine kinase inhibitors from the NMR-based screening of fragments.

P J Hajduk1, A Gomtsyan, S Didomenico, M Cowart, E K Bayburt, L Solomon, J Severin, R Smith, K Walter, T F Holzman, A Stewart, S McGaraughty, M F Jarvis, E A Kowaluk, S W Fesik.   

Abstract

A strategy is described for designing high-affinity ligands using information derived from the NMR-based screening of fragments. The method involves the fragmentation of an existing lead molecule, identification of suitable replacements for the fragments, and incorporation of the newly identified fragments into the original scaffold. Using this technique, novel substituents were rapidly identified and incorporated into lead inhibitors of adenosine kinase that exhibited potent in vitro and in vivo activities. This approach is a valuable strategy for modifying existing leads to improve their potency, bioavailability, or toxicity profile and thus represents a useful technique for lead optimization.

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Year:  2000        PMID: 11123986     DOI: 10.1021/jm000373a

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  9 in total

1.  The Ligand Binding Landscape of Diacylglycerol Kinases.

Authors:  Caroline E Franks; Sean T Campbell; Benjamin W Purow; Thurl E Harris; Ku-Lung Hsu
Journal:  Cell Chem Biol       Date:  2017-07-14       Impact factor: 8.116

2.  Screening a fragment cocktail library using ultrafiltration.

Authors:  Sayaka Shibata; Zhongsheng Zhang; Konstantin V Korotkov; Jaclyn Delarosa; Alberto Napuli; Angela M Kelley; Natasha Mueller; Jennifer Ross; Frank H Zucker; Frederick S Buckner; Ethan A Merritt; Christophe L M J Verlinde; Wesley C Van Voorhis; Wim G J Hol; Erkang Fan
Journal:  Anal Bioanal Chem       Date:  2011-07-13       Impact factor: 4.142

3.  Lessons for fragment library design: analysis of output from multiple screening campaigns.

Authors:  I-Jen Chen; Roderick E Hubbard
Journal:  J Comput Aided Mol Des       Date:  2009-06-03       Impact factor: 3.686

4.  A three-stage biophysical screening cascade for fragment-based drug discovery.

Authors:  Ellene H Mashalidis; Paweł Śledź; Steffen Lang; Chris Abell
Journal:  Nat Protoc       Date:  2013-10-24       Impact factor: 13.491

Review 5.  Adenosine kinase: exploitation for therapeutic gain.

Authors:  Detlev Boison
Journal:  Pharmacol Rev       Date:  2013-04-16       Impact factor: 25.468

6.  A method for the second-site screening of K-Ras in the presence of a covalently attached first-site ligand.

Authors:  Qi Sun; Jason Phan; Anders R Friberg; DeMarco V Camper; Edward T Olejniczak; Stephen W Fesik
Journal:  J Biomol NMR       Date:  2014-08-03       Impact factor: 2.835

7.  Overcoming the limitations of fragment merging: rescuing a strained merged fragment series targeting Mycobacterium tuberculosis CYP121.

Authors:  Sean A Hudson; Sachin Surade; Anthony G Coyne; Kirsty J McLean; David Leys; Andrew W Munro; Chris Abell
Journal:  ChemMedChem       Date:  2013-06-20       Impact factor: 3.466

Review 8.  NMR approaches in structure-based lead discovery: recent developments and new frontiers for targeting multi-protein complexes.

Authors:  David M Dias; Alessio Ciulli
Journal:  Prog Biophys Mol Biol       Date:  2014-08-28       Impact factor: 3.667

Review 9.  NMR-Fragment Based Virtual Screening: A Brief Overview.

Authors:  Meenakshi Singh; Benjamin Tam; Barak Akabayov
Journal:  Molecules       Date:  2018-01-25       Impact factor: 4.411

  9 in total

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