Literature DB >> 11108707

Profiles from structure based sequence alignment of porins can identify beta stranded integral membrane proteins.

T V Gnanasekaran1, S Peri, A Arockiasamy, S Krishnaswamy.   

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Year:  2000        PMID： 11108707     DOI： 10.1093/bioinformatics/16.9.839

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


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  4 in total

1.  Outer membrane proteins can be simply identified using secondary structure element alignment.

Authors:  Ren-Xiang Yan; Zhen Chen; Ziding Zhang
Journal:  BMC Bioinformatics       Date:  2011-03-17       Impact factor: 3.169

2.  TMBETA-NET: discrimination and prediction of membrane spanning beta-strands in outer membrane proteins.

Authors:  M Michael Gromiha; Shandar Ahmad; Makiko Suwa
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

3.  Discrimination of outer membrane proteins with improved performance.

Authors:  Changhui Yan; Jing Hu; Yingfeng Wang
Journal:  BMC Bioinformatics       Date:  2008-01-24       Impact factor: 3.169

4.  TIM-Finder: a new method for identifying TIM-barrel proteins.

Authors:  Jing-Na Si; Ren-Xiang Yan; Chuan Wang; Ziding Zhang; Xiao-Dong Su
Journal:  BMC Struct Biol       Date:  2009-12-14
  4 in total

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