Literature DB >> 11102697

Detecting the form of selection from DNA sequence data.

S P Otto1.   

Abstract

Clues to our evolutionary history lie hidden within DNA sequence data. One of the great challenges facing population geneticists is to identify and accurately interpret these clues. This task is made especially difficult by the fact that many different evolutionary processes can lead to similar observations. For example, low levels of polymorphism within a region can be explained by a low local mutation rate, by selection having eliminated deleterious mutations, or by the recent spread to fixation of a beneficial allele. Theoretical advances improve our ability to distinguish signals left by different evolutionary processes. In particular, a new test might better detect the footprint of selection having favored the spread of a beneficial allele.

Mesh:

Year:  2000        PMID: 11102697     DOI: 10.1016/s0168-9525(00)02141-7

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  26 in total

1.  A microsatellite-based multilocus screen for the identification of local selective sweeps.

Authors:  Christian Schlötterer
Journal:  Genetics       Date:  2002-02       Impact factor: 4.562

2.  The signature of positive selection at randomly chosen loci.

Authors:  Molly Przeworski
Journal:  Genetics       Date:  2002-03       Impact factor: 4.562

3.  Interrogating a high-density SNP map for signatures of natural selection.

Authors:  Joshua M Akey; Ge Zhang; Kun Zhang; Li Jin; Mark D Shriver
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

4.  Intron presence-absence polymorphism in Drosophila driven by positive Darwinian selection.

Authors:  Ana Llopart; Josep M Comeron; Frédéric G Brunet; Daniel Lachaise; Manyuan Long
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

5.  Allele excess at neutrally evolving microsatellites and the implications for tests of neutrality.

Authors:  Christian Schlötterer; Max Kauer; Daniel Dieringer
Journal:  Proc Biol Sci       Date:  2004-04-22       Impact factor: 5.349

6.  Molecular evolution of the sheep prion protein gene.

Authors:  Jon Slate
Journal:  Proc Biol Sci       Date:  2005-11-22       Impact factor: 5.349

7.  Molecular evolution and population genetic analysis of candidate female reproductive genes in Drosophila.

Authors:  Tami M Panhuis; Willie J Swanson
Journal:  Genetics       Date:  2006-06-18       Impact factor: 4.562

8.  Introduction. Putting the 'bio' into bioinformatics.

Authors:  Lindell Bromham
Journal:  Biol Lett       Date:  2009-04-22       Impact factor: 3.703

9.  Evidence for positive selection and population structure at the human MAO-A gene.

Authors:  Yoav Gilad; Shai Rosenberg; Molly Przeworski; Doron Lancet; Karl Skorecki
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

10.  Human Y-chromosome variation and male dysfunction.

Authors:  Cláudia Márcia Benedetto de Carvalho; Fabrício Rodrigues Santos
Journal:  J Mol Genet Med       Date:  2005-12-06
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