Literature DB >> 11101560

Randomly amplified polymorphic DNA analysis of Erysipelothrix spp.

A T Okatani1, H Hayashidani, T Takahashi, T Taniguchi, M Ogawa, K Kaneko.   

Abstract

The usefulness of randomly amplified polymorphic DNA method (RAPD) to identify each species of genus Erysipelothrix and for epidemiological analysis of this genus was studied. Eighty-one strains and 18 random primers were tested. Among the tested primers, the primers NK51 (GGTGGTGGTATC) and NK6 (CCCGCGCCCC) produced noticeable results. The primer NK51 revealed four species-specific RAPD patterns. Of the 66 strains of E. rhusiopathiae, 64 had the same unique band of 884 bp. Of the 12 strains of E. tonsillarum, 11 produced a 1,265-bp band. In addition, two strains, previously thought to be E. rhusiopathiae, produced the 1,265-bp band, suggesting that they had been misclassified. One strain of E. tonsillarum produced the 884-bp band, suggesting that it too was E. rhusiopathiae. The E. rhusiopathiae strain of serovar 13 produced a 650-bp band, and the strain of serovar 18 produced a clear 420-bp band as well as three weak bands of 1,265, 918, and 444 bp. The primer NK6 revealed 14 RAPD patterns that were not serovar specific. However, different patterns were produced among strains of the same serovar showing that the RAPD method is able to identify the genetic variations of strains of this genus and can rapidly and easily differentiate strains of the same serovar. Based on these results, we concluded that the RAPD method with primers NK51 and NK6 is a rapid and reliable method to identify the species of this genus; we also concluded that this method might be a useful tool for the epidemiological analysis of the Erysipelothrix species.

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Year:  2000        PMID: 11101560      PMCID: PMC87601     

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  27 in total

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Authors:  J M Warner; J D Oliver
Journal:  Appl Environ Microbiol       Date:  1999-03       Impact factor: 4.792

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5.  Strain-specific identification of probiotic Lactobacillus rhamnosus with randomly amplified polymorphic DNA-derived PCR primers.

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8.  Classification of Erysipelothrix strains on the basis of restriction fragment length polymorphisms.

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3.  Serotyping of 800 strains of Erysipelothrix isolated from pigs affected with erysipelas and discrimination of attenuated live vaccine strain by genotyping.

Authors:  Yumiko Imada; Ai Takase; Reiko Kikuma; Yoshifumi Iwamaru; Shigehiro Akachi; Yûji Hayakawa
Journal:  J Clin Microbiol       Date:  2004-05       Impact factor: 5.948

4.  A combinational approach of multilocus sequence typing and other molecular typing methods in unravelling the epidemiology of Erysipelothrix rhusiopathiae strains from poultry and mammals.

Authors:  Traute Janßen; Matthias Voss; Michael Kühl; Torsten Semmler; Hans-Christian Philipp; Christa Ewers
Journal:  Vet Res       Date:  2015-07-21       Impact factor: 3.683

  4 in total

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