Literature DB >> 11101297

Heme redox potential control in de novo designed four-alpha-helix bundle proteins.

J M Shifman1, B R Gibney, R E Sharp, P L Dutton.   

Abstract

The effects of various mechanisms of metalloporphyrin reduction potential modulation were investigated experimentally using a robust, well-characterized heme protein maquette, synthetic protein scaffold H10A24 [¿CH(3)()CONH-CGGGELWKL.HEELLKK.FEELLKL.AEERLKK. L-CONH(2)()¿(2)](2). Removal of the iron porphyrin macrocycle from the high dielectric aqueous environment and sequestration within the hydrophobic core of the H10A24 maquette raises the equilibrium reduction midpoint potential by 36-138 mV depending on the hydrophobicity of the metalloporphyrin structure. By incorporating various natural and synthetic metalloporphyrins into a single protein scaffold, we demonstrate a 300-mV range in reduction potential modulation due to the electron-donating/withdrawing character of the peripheral macrocycle substituents. Solution pH is used to modulate the metalloporphyrin reduction potential by 160 mV, regardless of the macrocycle architecture, by controlling the protonation state of the glutamate involved in partial charge compensation of the ferric heme. Attempts to control the reduction potential by inserting charged amino acids into the hydrophobic core at close proximity to the metalloporphyrin lead to varied success, with H10A24-L13E lowering the E(m8.5) by 40 mV, H10A24-E11Q raising it by 50 mV, and H10A24-L13R remaining surprisingly unaltered. Modifying the charge of the adjacent metalloporphyrin, +1 for iron(III) protoporphyrin IX or neutral for zinc(II) protoporphyrin IX resulted in a loss of 70 mV [Fe(III)PPIX](+) - [Fe(III)PPIX](+) interaction observed in maquettes. Using these factors in combination, we illustrate a 435-mV variation of the metalloporphyrin reduction midpoint potential in a simple heme maquette relative to the about 800-mV range observed for natural cytochromes. Comparison between the reduction potentials of the heme maquettes and other de novo designed heme proteins reveals global trends in the E(m) values of synthetic cytochromes.

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Year:  2000        PMID: 11101297     DOI: 10.1021/bi000927b

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  31 in total

1.  Total synthesis of cytochrome b562 by native chemical ligation using a removable auxiliary.

Authors:  D W Low; M G Hill; M R Carrasco; S B Kent; P Botti
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-05       Impact factor: 11.205

Review 2.  De novo proteins from designed combinatorial libraries.

Authors:  Michael H Hecht; Aditi Das; Abigail Go; Luke H Bradley; Yinan Wei
Journal:  Protein Sci       Date:  2004-07       Impact factor: 6.725

Review 3.  Engineered proteins: redox properties and their applications.

Authors:  Shradha Prabhulkar; Hui Tian; Xiaotang Wang; Jun-Jie Zhu; Chen-Zhong Li
Journal:  Antioxid Redox Signal       Date:  2012-06-11       Impact factor: 8.401

4.  Modulation of function in a minimalist heme-binding membrane protein.

Authors:  Sandip Shinde; Jeanine M Cordova; Brian W Woodrum; Giovanna Ghirlanda
Journal:  J Biol Inorg Chem       Date:  2012-02-04       Impact factor: 3.358

5.  Design of amphiphilic protein maquettes: controlling assembly, membrane insertion, and cofactor interactions.

Authors:  Bohdana M Discher; Dror Noy; Joseph Strzalka; Shixin Ye; Christopher C Moser; James D Lear; J Kent Blasie; P Leslie Dutton
Journal:  Biochemistry       Date:  2005-09-20       Impact factor: 3.162

6.  Conformational transitions and redox potential shifts of cytochrome P450 induced by immobilization.

Authors:  Smilja Todorovic; Christiane Jung; Peter Hildebrandt; Daniel H Murgida
Journal:  J Biol Inorg Chem       Date:  2005-12-03       Impact factor: 3.358

7.  De novo design of a single-chain diphenylporphyrin metalloprotein.

Authors:  Gretchen M Bender; Andreas Lehmann; Hongling Zou; Hong Cheng; H Christopher Fry; Don Engel; Michael J Therien; J Kent Blasie; Heinrich Roder; Jeffrey G Saven; William F DeGrado
Journal:  J Am Chem Soc       Date:  2007-08-10       Impact factor: 15.419

Review 8.  Artificial photoactive proteins.

Authors:  Reza Razeghifard
Journal:  Photosynth Res       Date:  2008-10-02       Impact factor: 3.573

9.  De Novo Design, Solution Characterization, and Crystallographic Structure of an Abiological Mn-Porphyrin-Binding Protein Capable of Stabilizing a Mn(V) Species.

Authors:  Samuel I Mann; Animesh Nayak; George T Gassner; Michael J Therien; William F DeGrado
Journal:  J Am Chem Soc       Date:  2020-12-29       Impact factor: 15.419

10.  Spectral characterization of the recombinant mouse tumor suppressor 101F6 protein.

Authors:  Alajos Bérczi; Filip Desmet; Sabine Van Doorslaer; Han Asard
Journal:  Eur Biophys J       Date:  2009-11-27       Impact factor: 1.733

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