Literature DB >> 11099477

Quantitation of signal transduction.

S Krauss1, M D Brand.   

Abstract

Conventional qualitative approaches to signal transduction provide powerful ways to explore the architecture and function of signaling pathways. However, at the level of the complete system, they do not fully depict the interactions between signaling and metabolic pathways and fail to give a manageable overview of the complexity that is often a feature of cellular signal transduction. Here, we introduce a quantitative experimental approach to signal transduction that helps to overcome these difficulties. We present a quantitative analysis of signal transduction during early mitogen stimulation of lymphocytes, with steady-state respiration rate as a convenient marker of metabolic stimulation. First, by inhibiting various key signaling pathways, we measure their relative importance in regulating respiration. About 80% of the input signal is conveyed via identifiable routes: 50% through pathways sensitive to inhibitors of protein kinase C and MAP kinase and 30% through pathways sensitive to an inhibitor of calcineurin. Second, we quantify how each of these pathways differentially stimulates functional units of reactions that produce and consume a key intermediate in respiration: the mitochondrial membrane potential. Both the PKC and calcineurin routes stimulate consumption more strongly than production, whereas the unidentified signaling routes stimulate production more than consumption, leading to no change in membrane potential despite increased respiration rate. The approach allows a quantitative description of the relative importance of signal transduction pathways and the routes by which they activate a specific cellular process. It should be widely applicable.

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Year:  2000        PMID: 11099477     DOI: 10.1096/fj.00-0064com

Source DB:  PubMed          Journal:  FASEB J        ISSN: 0892-6638            Impact factor:   5.191


  8 in total

1.  Microgravity-related changes in gene expression after short-term exposure of Arabidopsis thaliana cell cultures.

Authors:  M Martzivanou; M Babbick; M Cogoli-Greuter; R Hampp
Journal:  Protoplasma       Date:  2006-12-16       Impact factor: 3.356

2.  Untangling the wires: a strategy to trace functional interactions in signaling and gene networks.

Authors:  Boris N Kholodenko; Anatoly Kiyatkin; Frank J Bruggeman; Eduardo Sontag; Hans V Westerhoff; Jan B Hoek
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-19       Impact factor: 11.205

3.  Control analysis of DNA microarray expression data.

Authors:  R Keira Curtis; Martin D Brand
Journal:  Mol Biol Rep       Date:  2002       Impact factor: 2.316

Review 4.  Synthetic multivalent ligands as probes of signal transduction.

Authors:  Laura L Kiessling; Jason E Gestwicki; Laura E Strong
Journal:  Angew Chem Int Ed Engl       Date:  2006-04-03       Impact factor: 15.336

5.  Cytokine stimulation of aerobic glycolysis in hematopoietic cells exceeds proliferative demand.

Authors:  Daniel E Bauer; Marian H Harris; David R Plas; Julian J Lum; Peter S Hammerman; Jeffrey C Rathmell; James L Riley; Craig B Thompson
Journal:  FASEB J       Date:  2004-06-04       Impact factor: 5.191

6.  Different actions of protein kinase C isoforms alpha and epsilon on gastric acid secretion.

Authors:  Michael Fährmann; Marc Kaufhold; Timo Rieg; Ursula Seidler
Journal:  Br J Pharmacol       Date:  2002-07       Impact factor: 8.739

7.  Bioenergetics of immune cells to assess rheumatic disease activity and efficacy of glucocorticoid treatment.

Authors:  A Kuhnke; G-R Burmester; S Krauss; F Buttgereit
Journal:  Ann Rheum Dis       Date:  2003-02       Impact factor: 19.103

Review 8.  Metabolic control analysis: biological applications and insights.

Authors:  M C Wildermuth
Journal:  Genome Biol       Date:  2000-12-08       Impact factor: 13.583

  8 in total

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