Literature DB >> 11095673

The NAD-dependent ligase encoded by yerG is an essential gene of Bacillus subtilis.

M A Petit1, S D Ehrlich.   

Abstract

DNA ligases are grouped into two families, ATP-dependent and NAD-dependent, according to the cofactor required for their activity. A surprising capability of both kinds of ligases to complement for one another in vivo has been observed. Bacillus subtilis harbours one NAD-dependent ligase, YerG, and two ATP-dependent ligases, YkoU and YoqV, this last one being encoded by the 134 kb lysogenic bacteriophage SPss and consisting of a single adenylation domain typical of ATP-dependent ligases. Because the genetics of ligases in B.subtilis had not been studied previously, the genes encoding for one ligase of each kind, yerG and yoqV, were investigated. We found that the yerG gene was essential in B.subtilis. This suggests that none of the ATP-dependent ligases was able to complement the yerG defect. In addition, the ATP-dependent ligase encoded by yoqV, when cloned on a plasmid under appropriate expression signals, was unable to rescue a yerG mutant strain. The two B.subtilis ligase genes yerG and yoqV were also introduced in an Escherichia coli strain encoding a thermosensitive ligase (ligts), and whereas yoqV did not complement the ligts defects, yerG fully complemented the growth and UV sensitivity defects of the lig mutant. We propose to rename the yerG and yoqV genes of B.subtilis ligA and ligB respectively.

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Year:  2000        PMID: 11095673      PMCID: PMC115163          DOI: 10.1093/nar/28.23.4642

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  17 in total

1.  Crystal structure of NAD(+)-dependent DNA ligase: modular architecture and functional implications.

Authors:  J Y Lee; C Chang; H K Song; J Moon; J K Yang; H K Kim; S T Kwon; S W Suh
Journal:  EMBO J       Date:  2000-03-01       Impact factor: 11.598

2.  Crystal structure of a DExx box DNA helicase.

Authors:  H S Subramanya; L E Bird; J A Brannigan; D B Wigley
Journal:  Nature       Date:  1996-11-28       Impact factor: 49.962

3.  Genetic and enzymatic characterization of a conditional lethal mutant of Escherichia coli K12 with a temperature-sensitive DNA ligase.

Authors:  E B Konrad; P Modrich; I R Lehman
Journal:  J Mol Biol       Date:  1973-07-15       Impact factor: 5.469

4.  Genetics and function of DNA ligase in Escherichia coli.

Authors:  M M Gottesman; M L Hicks; M Gellert
Journal:  J Mol Biol       Date:  1973-07-15       Impact factor: 5.469

5.  Processing of a sporulation sigma factor in Bacillus subtilis: how morphological structure could control gene expression.

Authors:  P Stragier; C Bonamy; C Karmazyn-Campelli
Journal:  Cell       Date:  1988-03-11       Impact factor: 41.582

6.  Mutational analysis of Escherichia coli DNA ligase identifies amino acids required for nick-ligation in vitro and for in vivo complementation of the growth of yeast cells deleted for CDC9 and LIG4.

Authors:  V Sriskanda; B Schwer; C K Ho; S Shuman
Journal:  Nucleic Acids Res       Date:  1999-10-15       Impact factor: 16.971

7.  Construction of a vector plasmid family and its use for molecular cloning in Streptococcus lactis.

Authors:  D Simon; A Chopin
Journal:  Biochimie       Date:  1988-04       Impact factor: 4.079

8.  In vitro mutagenesis and functional expression in Escherichia coli of a cDNA encoding the catalytic domain of human DNA ligase I.

Authors:  K Kodama; D E Barnes; T Lindahl
Journal:  Nucleic Acids Res       Date:  1991-11-25       Impact factor: 16.971

9.  DNA ligase and the pyridine nucleotide cycle in Salmonella typhimurium.

Authors:  U E Park; B M Olivera; K T Hughes; J R Roth; D R Hillyard
Journal:  J Bacteriol       Date:  1989-04       Impact factor: 3.490

10.  DNA ligase mutants of Escherichia coli.

Authors:  M Gellert; M L Bullock
Journal:  Proc Natl Acad Sci U S A       Date:  1970-11       Impact factor: 11.205

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  11 in total

1.  Novel bacterial NAD+-dependent DNA ligase inhibitors with broad-spectrum activity and antibacterial efficacy in vivo.

Authors:  Scott D Mills; Ann E Eakin; Ed T Buurman; Joseph V Newman; Ning Gao; Hoan Huynh; Kenneth D Johnson; Sushmita Lahiri; Adam B Shapiro; Grant K Walkup; Wei Yang; Suzanne S Stokes
Journal:  Antimicrob Agents Chemother       Date:  2010-12-28       Impact factor: 5.191

2.  Homology modeling of NAD+-dependent DNA ligase of the Wolbachia endosymbiont of Brugia malayi and its drug target potential using dispiro-cycloalkanones.

Authors:  Nidhi Shrivastava; Jeetendra K Nag; Jyoti Pandey; Rama Pati Tripathi; Priyanka Shah; Mohammad Imran Siddiqi; Shailja Misra-Bhattacharya
Journal:  Antimicrob Agents Chemother       Date:  2015-04-06       Impact factor: 5.191

3.  Discovery and design of DNA and RNA ligase inhibitors in infectious microorganisms.

Authors:  Robert V Swift; Rommie E Amaro
Journal:  Expert Opin Drug Discov       Date:  2009-12-01       Impact factor: 6.098

4.  A second NAD(+)-dependent DNA ligase (LigB) in Escherichia coli.

Authors:  V Sriskanda; S Shuman
Journal:  Nucleic Acids Res       Date:  2001-12-15       Impact factor: 16.971

5.  Temperature Sensitivity Conferred by ligA Alleles from Psychrophilic Bacteria upon Substitution in Mesophilic Bacteria and a Yeast Species.

Authors:  Jarosław A Pankowski; Stephanie M Puckett; Francis E Nano
Journal:  Appl Environ Microbiol       Date:  2016-01-15       Impact factor: 4.792

6.  Antibacterial Activity of Bacillus inaquosorum Strain T1 against pirABVp -Bearing Vibrio parahaemolyticus: Genetic and Physiological Characterization.

Authors:  Sarah E Avery; Susannah P Ruzbarsky; Amanda M Hise; Harold J Schreier
Journal:  Appl Environ Microbiol       Date:  2020-10-15       Impact factor: 4.792

7.  Essential bacterial helicases that counteract the toxicity of recombination proteins.

Authors:  Marie-Agnès Petit; Dusko Ehrlich
Journal:  EMBO J       Date:  2002-06-17       Impact factor: 11.598

8.  Evaluation of NAD(+) -dependent DNA ligase of mycobacteria as a potential target for antibiotics.

Authors:  Malgorzata Korycka-Machala; Ewelina Rychta; Anna Brzostek; Heather R Sayer; Anna Rumijowska-Galewicz; Richard P Bowater; Jarosław Dziadek
Journal:  Antimicrob Agents Chemother       Date:  2007-06-04       Impact factor: 5.191

9.  Molecular characterization of NAD+-dependent DNA ligase from Wolbachia endosymbiont of lymphatic filarial parasite Brugia malayi.

Authors:  Nidhi Shrivastava; Jeetendra Kumar Nag; Shailja Misra-Bhattacharya
Journal:  PLoS One       Date:  2012-07-16       Impact factor: 3.240

10.  Characterization of Agrobacterium tumefaciens DNA ligases C and D.

Authors:  Hui Zhu; Stewart Shuman
Journal:  Nucleic Acids Res       Date:  2007-05-08       Impact factor: 16.971

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