Literature DB >> 11093703

Enzymatic synthesis of UDP-(3-deoxy-3-fluoro)-D-galactose and UDP-(2-deoxy-2-fluoro)-D-galactose and substrate activity with UDP-galactopyranose mutase.

J N Barlow1, J S Blanchard.   

Abstract

The novel UDP-sugar uridine 5'-(3-deoxy-3-fluoro-D-galactopyranosyl diphosphate) (1) and UDP-(2-deoxy-2-fluoro)-D-galactose (2) have been prepared enzymatically and tested as substrate analogues for the enzyme UDP-galactopyranose mutase (UDP-Galp mutase EC 5.4.99.9). Turnover of both 1 and 2 by UDP-Galp mutase was observed by HPLC and 19F NMR. The HPLC elution profile and 19F chemical shift of the products are consistent with the formation of the predicted furanose forms of 1 and 2. The Km values for compounds 1 and 2 were similar to those of the natural substrate UDP-Galp (0.26 mM for 1, 0.2 mM for 2, and 0.6 mM for UDP-Galp), but the values for kcat were substantially different (1.6/min for 1, 0.02/min for 2, and 1364/min for UDP-Galp). A correlation was also observed between the equilibrium yield of product formed during turnover of UDP-sugar by UDP-Galp mutase (UDP-Galp, compound 1 or compound 2), and the amount of furanose present for the free sugar at thermal equilibrium in aqueous solution, using 1H and 19F NMR spectroscopy. The implications of these results to the mechanism of the unusual enzymatic reaction are discussed.

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Year:  2000        PMID: 11093703     DOI: 10.1016/s0008-6215(00)00135-x

Source DB:  PubMed          Journal:  Carbohydr Res        ISSN: 0008-6215            Impact factor:   2.104


  7 in total

1.  Real-time NMR monitoring of intermediates and labile products of the bifunctional enzyme UDP-apiose/UDP-xylose synthase.

Authors:  Paul Guyett; John Glushka; Xiaogang Gu; Maor Bar-Peled
Journal:  Carbohydr Res       Date:  2009-03-27       Impact factor: 2.104

2.  Synthetic UDP-furanoses as potent inhibitors of mycobacterial galactan biogenesis.

Authors:  Pauline Peltier; Martina Beláňová; Petronela Dianišková; Ruokun Zhou; Ruixiang Blake Zheng; Jean A Pearcey; Maju Joe; Patrick J Brennan; Caroline Nugier-Chauvin; Vincent Ferrières; Todd L Lowary; Richard Daniellou; Katarína Mikušová
Journal:  Chem Biol       Date:  2010-12-22

Review 3.  Structure, mechanism, and dynamics of UDP-galactopyranose mutase.

Authors:  John J Tanner; Leonardo Boechi; J Andrew McCammon; Pablo Sobrado
Journal:  Arch Biochem Biophys       Date:  2013-10-03       Impact factor: 4.013

4.  Investigation of binding of UDP-Galf and UDP-[3-F]Galf to UDP-galactopyranose mutase by STD-NMR spectroscopy, molecular dynamics, and CORCEMA-ST calculations.

Authors:  Yue Yuan; Dustin W Bleile; Xin Wen; David A R Sanders; Kenji Itoh; Hung-wen Liu; B Mario Pinto
Journal:  J Am Chem Soc       Date:  2008-02-16       Impact factor: 15.419

5.  Furanose-specific sugar transport: characterization of a bacterial galactofuranose-binding protein.

Authors:  Richard S P Horler; Axel Müller; David C Williamson; Jennifer R Potts; Keith S Wilson; Gavin H Thomas
Journal:  J Biol Chem       Date:  2009-09-10       Impact factor: 5.157

6.  Sugar nucleotide recognition by Klebsiella pneumoniae UDP-D-galactopyranose mutase: fluorinated substrates, kinetics and equilibria.

Authors:  James C Errey; Maretta C Mann; Shirley A Fairhurst; Lionel Hill; Michael R McNeil; James H Naismith; Jonathan M Percy; Chris Whitfield; Robert A Field
Journal:  Org Biomol Chem       Date:  2009-01-23       Impact factor: 3.876

Review 7.  Noncanonical reactions of flavoenzymes.

Authors:  Pablo Sobrado
Journal:  Int J Mol Sci       Date:  2012-11-05       Impact factor: 5.923

  7 in total

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