Literature DB >> 11090167

Identification of conserved residues contributing to the activities of adenovirus DNA polymerase.

H Liu1, J H Naismith, R T Hay.   

Abstract

Adenovirus codes for a DNA polymerase that is a member of the DNA polymerase alpha family and uses a protein primer for initiation of DNA synthesis. It contains motifs characteristic of a proofreading 3'-5'-exonuclease domain located in the N-terminal region and several polymerase motifs located in the C-terminal region. To determine the role of adenovirus DNA polymerase in DNA replication, 22 site-directed mutations were introduced into the conserved DNA polymerase motifs in the C-terminal region of adenovirus DNA polymerase and the mutant forms were expressed in insect cells using a baculovirus expression system. Each mutant enzyme was tested for DNA binding activity, the ability to interact with pTP, DNA polymerase catalytic activity, and the ability to participate in the initiation of adenovirus DNA replication. The mutant phenotypes identify functional domains within the adenovirus DNA polymerase and allow discrimination between the roles of conserved residues in the various activities carried out by the protein. Using the functional data in this study and the previously published structure of the bacteriophage RB69 DNA polymerase (J. Wang et al., Cell 89:1087-1099, 1997), it is possible to envisage how the conserved domains in the adenovirus DNA polymerase function.

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Year:  2000        PMID: 11090167      PMCID: PMC112450          DOI: 10.1128/jvi.74.24.11681-11689.2000

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  63 in total

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Authors:  C B Hwang; K L Ruffner; D M Coen
Journal:  J Virol       Date:  1992-03       Impact factor: 5.103

2.  Compilation and alignment of DNA polymerase sequences.

Authors:  J Ito; D K Braithwaite
Journal:  Nucleic Acids Res       Date:  1991-08-11       Impact factor: 16.971

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Authors:  I Joung; M S Horwitz; J A Engler
Journal:  Virology       Date:  1991-09       Impact factor: 3.616

Review 4.  Protein-priming of DNA replication.

Authors:  M Salas
Journal:  Annu Rev Biochem       Date:  1991       Impact factor: 23.643

5.  Adenovirus DNA replication: the function of the covalently bound terminal protein.

Authors:  R Pronk; M H Stuiver; P C van der Vliet
Journal:  Chromosoma       Date:  1992       Impact factor: 4.316

6.  Fidelity studies of the human DNA polymerase alpha. The most conserved region among alpha-like DNA polymerases is responsible for metal-induced infidelity in DNA synthesis.

Authors:  W C Copeland; N K Lam; T S Wang
Journal:  J Biol Chem       Date:  1993-05-25       Impact factor: 5.157

7.  Mutations in two cysteine-histidine-rich clusters in adenovirus type 2 DNA polymerase affect DNA binding.

Authors:  I Joung; J A Engler
Journal:  J Virol       Date:  1992-10       Impact factor: 5.103

8.  Crystal structure at 3.5 A resolution of HIV-1 reverse transcriptase complexed with an inhibitor.

Authors:  L A Kohlstaedt; J Wang; J M Friedman; P A Rice; T A Steitz
Journal:  Science       Date:  1992-06-26       Impact factor: 47.728

9.  Analysis of the adenovirus type 5 terminal protein precursor and DNA polymerase by linker insertion mutagenesis.

Authors:  D J Roovers; F M van der Lee; J van der Wees; J S Sussenbach
Journal:  J Virol       Date:  1993-01       Impact factor: 5.103

10.  Recognition of the adenovirus type 2 origin of DNA replication by the virally encoded DNA polymerase and preterminal proteins.

Authors:  S M Temperley; R T Hay
Journal:  EMBO J       Date:  1992-02       Impact factor: 11.598

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  11 in total

1.  A 21-amino acid peptide from the cysteine cluster II of the family D DNA polymerase from Pyrococcus horikoshii stimulates its nuclease activity which is Mre11-like and prefers manganese ion as the cofactor.

Authors:  Yulong Shen; Xiao-Feng Tang; Hideshi Yokoyama; Eriko Matsui; Ikuo Matsui
Journal:  Nucleic Acids Res       Date:  2004-01-02       Impact factor: 16.971

2.  Twinkle and POLG defects enhance age-dependent accumulation of mutations in the control region of mtDNA.

Authors:  Sjoerd Wanrooij; Petri Luoma; Gert van Goethem; Christine van Broeckhoven; Anu Suomalainen; Johannes N Spelbrink
Journal:  Nucleic Acids Res       Date:  2004-06-04       Impact factor: 16.971

Review 3.  Viral and cellular interactions during adenovirus DNA replication.

Authors:  Matthew Charman; Christin Herrmann; Matthew D Weitzman
Journal:  FEBS Lett       Date:  2019-12-17       Impact factor: 4.124

4.  Interregional Coevolution Analysis Revealing Functional and Structural Interrelatedness between Different Genomic Regions in Human Mastadenovirus D.

Authors:  Gabriel Gonzalez; Kanako O Koyanagi; Koki Aoki; Hidemi Watanabe
Journal:  J Virol       Date:  2015-04-01       Impact factor: 5.103

5.  DNA binding properties of the adenovirus DNA replication priming protein pTP.

Authors:  R N de Jong; L A T Meijer; P C van der Vliet
Journal:  Nucleic Acids Res       Date:  2003-06-15       Impact factor: 16.971

6.  Selective modification of adenovirus replication can be achieved through rational mutagenesis of the adenovirus type 5 DNA polymerase.

Authors:  Cristina Capella; Michael-John Beltejar; Caitlin Brown; Vincent Fong; Waaqo Daddacha; Baek Kim; Stephen Dewhurst
Journal:  J Virol       Date:  2012-07-18       Impact factor: 5.103

7.  Terminal proteins essential for the replication of linear plasmids and chromosomes in Streptomyces.

Authors:  K Bao; S N Cohen
Journal:  Genes Dev       Date:  2001-06-15       Impact factor: 11.361

Review 8.  Adenovirus DNA replication.

Authors:  Rob C Hoeben; Taco G Uil
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-03-01       Impact factor: 10.005

Review 9.  Progressive external ophthalmoplegia characterized by multiple deletions of mitochondrial DNA: unraveling the pathogenesis of human mitochondrial DNA instability and the initiation of a genetic classification.

Authors:  Gert Van Goethem; Jean-Jacques Martin; Christine Van Broeckhoven
Journal:  Neuromolecular Med       Date:  2003       Impact factor: 3.843

10.  Molecular architecture of adenovirus DNA polymerase and location of the protein primer.

Authors:  Arjan B Brenkman; Elise C Breure; Peter C van der Vliet
Journal:  J Virol       Date:  2002-08       Impact factor: 5.103

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