Literature DB >> 11088009

Horizontal gene transfer among microbial genomes: new insights from complete genome analysis.

J A Eisen1.   

Abstract

The determination and analysis of complete genome sequences has led to the suggestion that horizontal gene transfer may be much more extensive than previously appreciated. Many of these studies, however, rely on evidence that could be generated by forces other than gene transfer including selection, variable evolutionary rates, and biased sampling.

Mesh:

Year:  2000        PMID: 11088009     DOI: 10.1016/s0959-437x(00)00143-x

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  70 in total

1.  The closest BLAST hit is often not the nearest neighbor.

Authors:  L B Koski; G B Golding
Journal:  J Mol Evol       Date:  2001-06       Impact factor: 2.395

2.  Lateral transfer at the gene and subgenic levels in the evolution of eukaryotic enolase.

Authors:  P J Keeling; J D Palmer
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-28       Impact factor: 11.205

Review 3.  Mitochondria and hydrogenosomes are two forms of the same fundamental organelle.

Authors:  T Martin Embley; Mark van der Giezen; David S Horner; Patricia L Dyal; Peter Foster
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-01-29       Impact factor: 6.237

Review 4.  How big is the iceberg of which organellar genes in nuclear genomes are but the tip?

Authors:  W F Doolittle; Y Boucher; C L Nesbø; C J Douady; J O Andersson; A J Roger
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-01-29       Impact factor: 6.237

5.  A phylogenomic approach to bacterial phylogeny: evidence of a core of genes sharing a common history.

Authors:  Vincent Daubin; Manolo Gouy; Guy Perrière
Journal:  Genome Res       Date:  2002-07       Impact factor: 9.043

6.  Discordant phylogenies within the rrn loci of Rhizobia.

Authors:  Peter van Berkum; Zewdu Terefework; Lars Paulin; Sini Suomalainen; Kristina Lindström; Bertrand D Eardly
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

7.  HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes.

Authors:  S Garcia-Vallve; E Guzman; M A Montero; A Romeu
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

8.  Evolutionary implications of microbial genome tetranucleotide frequency biases.

Authors:  David T Pride; Richard J Meinersmann; Trudy M Wassenaar; Martin J Blaser
Journal:  Genome Res       Date:  2003-02       Impact factor: 9.043

9.  The balance of driving forces during genome evolution in prokaryotes.

Authors:  Victor Kunin; Christos A Ouzounis
Journal:  Genome Res       Date:  2003-07       Impact factor: 9.043

10.  An evolutionarily structured universe of protein architecture.

Authors:  Gustavo Caetano-Anollés; Derek Caetano-Anollés
Journal:  Genome Res       Date:  2003-07       Impact factor: 9.043

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